Job Description P77657 Confidence 81.63% Date Thu Jan 5 12:31:25 GMT 2012 Rank 1 Aligned Residues 61 % Identity 30% Template d1l5ia_ SCOP info Origin of replication-binding domain, RBD-like Origin of replication-binding domain, RBD-like DNA-binding domain of REP protein Resolution UNK

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	I	A	V	R	V	D	L	H	Y	P	K	I	V	D	N	G	D	N	I	C	C	F	P	N	L	E	P	G	V	I	S	R	M	R	E	S	L	R	A	K	L	E	A	D	R	T	R	K	V	R	E	D	K	R	I	Y	R	C	P	L	F	I	I	W	A	K	E	Y	S	E	S	G	K	C	H	Y	H	I
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	I	K	A	K	N	Y	F	L	T	Y	P	K	.	.	.	.	.	.	.	.	.	.	.	C	D	L	T	K	E	N	A	L	S	Q	I	T	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	T	P	T	N	K	L	F	I	K	I	C	R	E	L	H	E	N	G	E	P	H	L	H	I
Template Known Secondary structure													T	T	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S													T	T	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20												.	.	.	.	.	.	.	.	.	30	.	.	.	.	.																	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		112	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	L	L	F	N	K	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	Q	F	E	G	K	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		61	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions