Return to main results Retrieve Phyre Job Id

Job DescriptionQ2EES3
Confidence97.88%DateThu Jan 5 12:33:48 GMT 2012
Rank77Aligned Residues110
% Identity18%Templatec3pqcA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:probable gtp-binding protein engb; PDBTitle: crystal structure of thermotoga maritima ribosome biogenesis gtp-2 binding protein engb (ysxc/yiha) in complex with gdp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 












.
Query SS confidence 














































































.
Query Sequence  GVRQHGWRAIPAVCSEYGADTLPDRYRSDGRCLLFWQQAGISALKQELEVKTPYRAMNHPVIGVVTKADLASMEQISLV.
Query Conservation           
          

         

       
     

   
     













  
 


 .
Alig confidence 




















































.
























.
Template Conservation                                                       .       
      
           
Template Sequence  GYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPPQDSDLMMVEWM. KSLNIPFTIVLTKMDKVKMSERAKKL
Template Known Secondary structure 
BSSS



TTTTS


.TT


GGGS
GGG
Template Predicted Secondary structure 






















.











Template SS confidence 















































































   77..80.........90.........100.........110.........120......... 130.........140.........150.....
 
   82.......90.........100.........110...
Predicted Secondary structure  ...









Query SS confidence  . . .































Query Sequence  . . . KSWLREAGAHNVLVTSAVNNNGVTELFALLHT
Query Conservation  ...   

 

  


 


 








  
  
Alig confidence  ...































Template Conservation                   


  
 

  
   
  
Template Sequence  EEHRKVFSKYGEYTIIPTSSVTGEGISELLDLIST
Template Known Secondary structure  SS

S


TTT
TT
Template Predicted Secondary structure 










Template SS confidence 


































   156...160.........170.........180.........190
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions