 |
Job Description | Q2EES3 | Confidence | 97.59% | Date | Thu Jan 5 12:33:48 GMT 2012 |
Rank | 124 | Aligned Residues | 90 |
% Identity | 16% | Template | c3k53B_ |
PDB info |
PDB header:metal transport | Chain: B: PDB Molecule:ferrous iron transport protein b; |
PDBTitle: crystal structure of nfeob from p. furiosus
|
Resolution | 2.70 Å |
|
 |
  |   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | Y | G | A | D | T | L | P | D | R | Y | R | S | D | G | R | C | L | L | F | W | Q | Q | A | G | I | S | A | L | K | Q | E | L | E | V | K | T | P | Y | R | A | M | N | H | P | V | I | G | V | V | T | K | A | D | L | A | S | M | E | Q | I | S | L | V | K | S | W | L | R | E | A | G | A | H | N | V | L | V | T | S |
Query Conservation |   |
  |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |
|
|
|   |   |   |   |
|
|   |
|
|   |   |
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |
|   |   |   |
Template Sequence |   |
D | E | L | I | A | R | N | F | I | L | D | G | N | A | D | V | I | V | D | I | V | D | S | T | C | L | M | R | N | L | F | L | T | L | E | L | . |
. |
F | E | M | E | V | K | N | I | I | L | V | L | N | K | F | D | L | L | A | K | I | D | I | K | K | M | R | K | E | L | . |
. |
. |
. |
G | V | P | V | I | P | T | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |  |  |  | G | G | G |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  | T | T |
|
| S |  |  |  |  |  |  | T |
|
|
|
|
|
| B |
|  |  |  |  |  |  |  |  | . | . | . | . | T | S |
|  |  |  |
| B |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
69 | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | |
|
. | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | |
|
|
|
. | . | . | . | . | 140 | . | . |
  |
  |   |
98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | V | N | N | N | G | V | T | E | L | F | A | L | L | H | T |
Query Conservation |   |
|   |
|
|
|
|
|
|
|
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |
Template Sequence |   |
A | K | K | G | E | G | V | E | E | L | K | R | M | I | A | L |
Template Known Secondary structure |   |
T | T | T | T | B | T |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
147 | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|