Job Description Q2EES3 Confidence 33.38% Date Thu Jan 5 12:33:48 GMT 2012 Rank 290 Aligned Residues 75 % Identity 17% Template c3dm5A_ PDB info PDB header:rna binding protein, transport protein Chain: A: PDB Molecule:signal recognition 54 kda protein; PDBTitle: structures of srp54 and srp19, the two proteins assembling2 the ribonucleic core of the signal recognition particle3 from the archaeon pyrococcus furiosus. Resolution 2.51 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	D	R	Y	R	S	D	G	R	C	L	L	F	W	Q	Q	A	G	I	S	A	L	K	Q	E	L	E	V	K	T	P	Y	R	A	M	N	H	P	V	I	G	V	V	T	K	A	D	L	A	S	M	E	Q	I	S	L	V	K	S	W	L	R	E	A	G	A	H	N	V	L	V	T	S	A	V	N	N	N	G
Query Conservation
Alig confidence																																			.	.	.	.												.	.																			.						.	.
Template Conservation																																			.	.	.	.												.	.																			.						.	.
Template Sequence		I	S	N	V	I	H	P	H	E	V	I	L	V	I	D	G	T	I	G	Q	Q	A	Y	N	Q	A	L	A	F	K	E	A	T	.	.	.	.	P	I	G	S	I	I	V	T	K	L	D	.	.	G	S	A	K	G	G	G	A	L	S	A	V	A	A	T	G	A	P	.	I	K	F	I	G	.	.	T	G	E	K
Template Known Secondary structure									S								G	G	G	G	G	G											S		.	.	.	.	T	T									S	.	.	S		S	S										T	T				.						.	.		S	S	S
Template Predicted Secondary structure																																			.	.	.	.												.	.																			.						.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.					240	.	.	.	.	.	.	.	.	.	250			.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.			.	.	.	.
		104	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	D	D	I
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		278	.	280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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