Job Description Q2EES3 Confidence 97.14% Date Thu Jan 5 12:33:48 GMT 2012 Rank 180 Aligned Residues 78 % Identity 18% Template c3cphA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:ras-related protein sec4; PDBTitle: crystal structure of sec4 in complex with rab-gdi Resolution 2.90 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		R	C	L	L	F	W	Q	Q	A	G	I	S	A	L	K	Q	E	L	E	V	K	T	P	Y	R	A	M	N	H	P	V	I	G	V	V	T	K	A	D	L	A	.	S	M	E	Q	I	S	L	V	K	S	W	L	R	E	A	G	A	H	N	V	L	V	T	S	A	V	N	N	N	G	V	T	E	L	F	A	L	L
Query Conservation																																											.
Alig confidence																																											.																			.
Template Conservation																																																														.
Template Sequence		L	V	Y	D	V	T	D	E	R	T	F	T	N	I	K	Q	W	F	K	T	V	N	E	H	A	N	D	E	A	Q	L	L	L	V	G	N	K	S	D	M	E	T	R	V	V	T	A	D	Q	G	E	A	L	A	K	E	L	G	I	P	.	F	I	E	S	S	A	K	N	D	D	N	V	N	E	I	F	F	T	L
Template Known Secondary structure						T	T							T												T	T	T		S									T	T		S	S			S													T			.					B	T	T	T	T	B	S	S
Template Predicted Secondary structure																																																														.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions