Job Description Q2EES3 Confidence 97.40% Date Thu Jan 5 12:33:48 GMT 2012 Rank 148 Aligned Residues 92 % Identity 8% Template c2yc2D_ PDB info PDB header:transport protein Chain: D: PDB Molecule:small rab-related gtpase; PDBTitle: intraflagellar transport complex 25-27 from chlamydomonas Resolution 2.59 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60							.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																													.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.
Query Sequence		E	Y	G	A	D	T	L	P	D	R	Y	R	S	D	G	R	C	L	L	F	W	Q	Q	A	G	I	S	A	L	K	Q	E	L	E	V	K	T	P	Y	R	A	M	N	.	.	.	.	.	.	H	P	V	I	G	V	V	T	K	A	D	L	A	S	M	E	Q	I	S	L	V	K	S	W	L	R	E	A	G	A	H
Query Conservation																																													.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.												.						.	.	.											.
Template Conservation																																																														.						.	.	.											.
Template Sequence		D	L	Y	K	E	Q	I	S	Q	Y	W	N	G	V	Y	Y	A	I	L	V	F	D	V	S	S	M	E	S	F	E	S	C	K	A	W	F	E	L	L	K	S	A	R	P	D	R	E	R	P	L	R	A	V	L	V	A	N	K	T	Q	.	V	R	L	D	M	.	.	.	A	Q	D	W	A	T	T	N	T	L	.
Template Known Secondary structure									S	T	T													T	T																				S		T	T	S													.						.	.	.									T		.
Template Predicted Secondary structure																																																														.						.	.	.											.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.				.	.	.	.	.	150	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		N	V	L	V	T	S	A	V	N	N	N	.	.	G	V	T	E	L	F	A	L	L	H	T	E
Query Conservation													.	.
Alig confidence													.	.
Template Conservation
Template Sequence		D	F	F	D	V	S	A	A	D	A	P	F	L	S	I	A	T	T	F	Y	R	N	Y	E	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions