|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | |
|
|
|
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
Query Sequence |   |
A | G | V | R | Q | H | G | W | R | A | I | P | A | V | C | S | E | Y | G | A | D | T | L | P | D | R | Y | R | S | D | G | R | C | L | L | F | W | Q | Q | A | G | I | S | A | L | K | Q | E | L | E | V | K | T | P | Y | R | A | M | N | H | P | V | I | G | V | V | T | K | A | D | L | A | S | M | E | Q | . |
. |
. |
. |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|   | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
Template Conservation |   |
  |
|
|   |   |   |   |   |   |   | . |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |   | . | . |   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|   |
|
|
|   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
A | G | X | R | K | K | G | K | V | Y | . |
E | T | T | E | K | Y | S | V | L | R | A | L | K | A | I | D | R | S | E | V | V | A | V | V | L | D | G | E | E | G | I | I | E | . |
. |
Q | D | K | R | I | A | G | Y | A | H | E | A | G | K | A | V | V | I | V | V | N | K | W | D | A | V | D | K | D | E | S | T | X | K |
Template Known Secondary structure |   |
 |  |  | T |
| B | T | T | B |
| . |
|
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S |  |  |  |  |  |  |  | T | T | T |
|
|
|  | . | . |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |
| G | G | G | S |
|
|
| T | T |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
231 | . | . | . | . | . | . | . | . | 240 | |
. | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | |
|
. | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . |
  |
  |   |
|
|
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
Predicted Secondary structure |   |
. | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
I | S | L | V | K | S | W | L | R | E | A | G | A | H | N | V | L | V | T | S | A | V | N | N | N | G | V | T | E | L | F | A | L | L | H | T |
Query Conservation |   |
. | . |
|
|
|   |   |   |   |
|
|   |
|
|   |   |
|
|
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|   |   |
|   |   |
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|   |
|
|   |   |
|   |   |   |
|   |   |
Template Sequence |   |
E | F | E | E | N | I | R | D | H | F | Q | F | L | D | Y | A | P | I | L | F | X | S | A | L | T | K | K | R | I | H | T | L | X | P | A | I | I | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |
| G | G | G | T | T | S |
|  |  |  |
|
| T | T | T |
| T | T | G | G | G |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
308 | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . |
  |