Return to main results Retrieve Phyre Job Id

Job DescriptionQ2EES3
Confidence97.90%DateThu Jan 5 12:33:48 GMT 2012
Rank75Aligned Residues91
% Identity19%Templatec2hdnJ_
PDB info PDB header:translationChain: J: PDB Molecule:elongation factor ef-tu; PDBTitle: trypsin-modified elongation factor tu in complex with2 tetracycline at 2.8 angstrom resolution
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50.........60.. .......70....... ..80.........90..
Predicted Secondary structure 







.



.....



Query SS confidence 











































.














. . . . .














Query Sequence  YGADTLPDRYRSDGRCLLFWQQAGISALKQELEVKTPYRAMNHP. VIGVVTKADLASMEQ. . . . . ISLVKSWLREAGAHN
Query Conservation      

         

       
     

   
     


.










  
 .....


    

 

  
Alig confidence 


























..














.














.....














Template Conservation 
    
 
    
 






  
   ..

 


 
   


   

 


 
          
               
Template Sequence  YVKNMITGAAQMDGAILVVAATDGPMP. . QTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQYDFPG
Template Known Secondary structure  TSS

SSTTT
S
..T



TTT


TTS
T
Template Predicted Secondary structure 







..
















Template SS confidence 















































































   87..90.........100.........110... ......120.........130.........140.........150.........160....
 
   93......100.........110.
Predicted Secondary structure  ....





Query SS confidence  . . . .


















Query Sequence  . . . . VLVTSAVNNNGVTELFALL
Query Conservation  ....

 


 








  
Alig confidence  ....


















Template Conservation       

 

  
 
        
Template Sequence  DDTPIVRGSALKALEGDAEWEAK
Template Known Secondary structure  TT



T
Template Predicted Secondary structure 















Template SS confidence 






















   165....170.........180.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions