Job Description Q2EES3 Confidence 71.77% Date Thu Jan 5 12:33:48 GMT 2012 Rank 267 Aligned Residues 81 % Identity 10% Template c1tndA_ PDB info PDB header:binding protein(gtp) Chain: A: PDB Molecule:transducin; PDBTitle: the 2.2 angstroms crystal structure of transducin-alpha complexed with2 gtp gamma s Resolution 2.20 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.											.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.																		.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.										.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.										.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	R	C	L	L	F	W	Q	Q	A	G	I	S	.	.	.	.	.	.	.	.	.	.	A	L	K	Q	E	L	E	V	K	.	.	.	.	.	T	P	Y	R	A	M	N	H	P	V	I	G	V	V	T	K	A	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	M	E	Q	I	S
Query Conservation															.	.	.	.	.	.	.	.	.	.										.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.										.	.	.	.	.			.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.
Template Sequence		T	C	I	I	F	I	A	A	L	S	A	Y	D	M	V	L	V	E	D	D	E	V	N	R	M	H	E	S	L	H	L	F	N	S	I	C	N	H	R	.	Y	F	A	T	T	S	I	V	L	F	L	N	K	K	D	V	F	S	E	K	I	K	K	A	H	L	S	I	C	F	P	D	Y	N	G	P	N	T	Y	E
Template Known Secondary structure		S								G	G	G	G	G		B		S	S		T	T	S	B														T		S	.	G	G	G	S																		T	T	S		G	G	G	T		T	T			S
Template Predicted Secondary structure																																									.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		80	.	.	.	.	.	.	.	.											.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	K	S	W	L	R	E	A	.	.	.	.	.	.	.	.	.	.	G	A	H	N	V	L	V	T	S	A	V	N	N	N	G	V	T	E	L	F	A	L	L	H	T
Query Conservation											.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	G	N	Y	I	K	V	Q	F	L	E	L	N	M	R	R	D	V	K	E	I	Y	S	H	M	T	C	A	T	D	T	Q	N	V	K	F	V	F	D	A	V	T	D
Template Known Secondary structure													T	T		T	T	B	T	T	B									T	T
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions