Job Description Q2EES3 Confidence 32.19% Date Thu Jan 5 12:33:48 GMT 2012 Rank 293 Aligned Residues 75 % Identity 17% Template c1j8yF_ PDB info PDB header:signaling protein Chain: F: PDB Molecule:signal recognition 54 kda protein; PDBTitle: signal recognition particle conserved gtpase domain from a.2 ambivalens t112a mutant Resolution 2.00 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	D	R	Y	R	S	D	G	R	C	L	L	F	W	Q	Q	A	G	I	S	A	L	K	Q	E	L	E	V	K	T	P	Y	R	A	M	N	H	P	V	I	G	V	V	T	K	A	D	L	A	S	M	E	Q	I	S	L	V	K	S	W	L	R	E	A	G	A	H	N	V	L	V	T	S	A	V	N	N	N	G
Query Conservation
Alig confidence																																		.	.	.	.													.	.																			.						.	.
Template Conservation																																		.	.	.	.													.	.																			.						.	.
Template Sequence		I	Y	E	A	I	K	P	D	E	V	T	L	V	I	D	A	S	I	G	Q	K	A	Y	D	L	A	S	K	F	N	Q	A	.	.	.	.	S	K	I	G	T	I	I	I	T	K	M	D	.	.	G	T	A	K	G	G	G	A	L	S	A	V	A	A	T	G	A	T	.	I	K	F	I	G	.	.	T	G	E	K
Template Known Secondary structure									S								G	G	G	G	G	G												.	.	.	.		T	T								T	T	.	.	S		S											T	T	T			.						.	.		S	S	S
Template Predicted Secondary structure																																		.	.	.	.													.	.																			.						.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.					.	240	.	.	.	.	.	.	.	.	.	250			.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.			.	.	.	.
		104	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	D	E	L
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		278	.	280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions