Return to main results Retrieve Phyre Job Id

Job DescriptionP42641
Confidence99.22%DateThu Jan 5 12:02:02 GMT 2012
Rank236Aligned Residues157
% Identity15%Templated1z06a1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution1.81

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   162.......170.........180.........190.........200.........210.........220.........230.........240.
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  VGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVL
Query Conservation 




 









 

  
  

  




 
  
 
       
 
 





  
     

  






   
Alig confidence 






















































.....



















Template Conservation 
 



  






 
     
                                .....                    
Template Sequence  IIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTA. . . . . GQERFRKSMVQHYYRNVHAV
Template Known Secondary structure 

TTSSSS

SS




S

TT

.....
STTTTT

Template Predicted Secondary structure 





















.....






Template SS confidence 















































































   36...40.........50.........60.........70.........80.........90 .........100.........110
 
   242.......250.........260.........270.........280.........290.. .......300.........310.........
Predicted Secondary structure 
























.








.
Query SS confidence 


















































.


























.
Query Sequence  LHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVE. AEEKAKAIAEALGWEDKYYLISAASGL.
Query Conservation 
 


               
  

      
  
  





 

     .       
         

 


  
 .
Alig confidence 



























....


















.













..










.
Template Conservation                              ....          
 
               
     ..   
 



   
Template Sequence  VFVYDMTNMASFHSLPAWIEECKQHLLA. . . . NDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSM. . PLFETSAKNPND
Template Known Secondary structure  TT
T


....S



TT
GGG

S
TT
..


SSSGGG
Template Predicted Secondary structure 














....




















..







Template SS confidence 















































































   111........120.........130........ .140.........150.........160.........170.. .......180....
 
   320.........
Predicted Secondary structure  ..
Query SS confidence  . .









Query Sequence  . . GVKDLCWDVM
Query Conservation  ..


 
   
 
Alig confidence  ..









Template Conservation     
   
  

Template Sequence  NDHVEAIFMTLA
Template Known Secondary structure  GS

Template Predicted Secondary structure 



Template SS confidence 











   185....190......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions