|   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | V | D | E | A | S | I | L | V | V | A | G | D | G | G | N | G | C | V | S | F | R | R | E | K | Y | I | P | K | G | G | P | D | G | G | D | G | G | D | G | G | D | V | W | M | E | A | D | E | N | L | N | T | L | I | D | Y | R | F | E | K | S | F | R | A | E | R | G | Q | N | G | A | S | R | D | C | T | G | K | R |
Query Conservation |   |
|   |
|   |   |   |
|   |   |   |   |
|   |
|
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|   |
|
|   |
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |
|   |
|   |
|
|   |
|
|   |
|   |   |
|
|   |
|
|
|   |   |   |   |
|
|
|
|
|
|   |
|
|   |
|
|   |
|   |
|   |
|
|   |   |   |   |
|
|   |   |   |   | . |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |
Template Sequence |   |
F | Q | D | V | L | V | I | T | V | A | A | G | R | G | G | D | G | A | V | S | F | R | R | E | K | F | V | P | K | G | G | P | D | G | G | D | G | G | R | G | G | S | V | Y | L | R | A | R | G | S | V | D | S | L | S | R | L | S | . |
K | R | T | Y | K | A | E | D | G | E | H | G | R | G | S | Q | Q | H | G | R | G |
Template Known Secondary structure |   |
|
| S |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
| B |
|
| B | T | T | B | S |
|
|
| B |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
| T | T |
|
| S | S | T | T | S |
| . | S | S |
|  |  |
|
|
|
|
|
|
| B | T | T | T | B |
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
| . |
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | K | D | V | T | I | K | V | P | V | G | T | R | V | I | D | Q | G | T | G | E | T | M | G | D | M | T | K | H | G | Q | R | L | L | V | A | K | G | G | W | H | G | L | G | N | T | R | F | K | S | S | V | N | R | T | P | R | Q | K | T | N | G | T | P | G | D | K | R | E | L | L | L | E | L | M | L |
Query Conservation |   |
|   |
|   |   |   |   |
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |
|   |
|
|   |
|
|   |
|   |
|   |   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |   |
|
|
|   |
|
|   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |
|
|
|
|
|
Template Sequence |   |
G | E | D | L | V | I | E | V | P | R | G | T | R | V | F | D | A | D | T | G | E | L | L | A | D | L | T | E | E | G | Q | T | V | L | V | A | R | G | G | A | G | G | R | G | N | M | H | F | V | S | P | T | R | Q | A | P | R | F | A | E | A | G | E | E | G | E | K | R | R | L | R | L | E | L | M | L |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |
| S | S |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |
| S | T | T |
|  |  |  |  |  |
|
|
|
|
|
|
|
| G | G | G | G |
|
| S | S |
| S | S |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . |
  |