Return to main results Retrieve Phyre Job Id

Job DescriptionP42641
Confidence99.53%DateThu Jan 5 12:02:02 GMT 2012
Rank108Aligned Residues158
% Identity14%Templated1n0ua2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution2.12

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   162.......170.........180.........190.........200.. .......210.........220........
Predicted Secondary structure 

















.............










Query SS confidence 








































. . . . . . . . . . . . .

























Query Sequence  VGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVR. . . . . . . . . . . . . MDNEKSFVVADIPGLIEGAAEGAGLG
Query Conservation 




 









 

  
  

  




 
  
 
 .............      
 
 





  
     

Alig confidence 








































.............




















.....
Template Conservation 




  
 




 
 
      
                   
      

          




   
   .....
Template Sequence  MSVIAHVDHGKSTLTDSLVQRAGIISAGITIKSTAISLYSEMSDEDVKEIKQKTDGNSFLINLIDSPGHVDFSSE. . . . .
Template Known Secondary structure 

GGGTB

B










SS


SS





SS
.....
Template Predicted Secondary structure 




























.....
Template SS confidence 















































































   22.......30.........40.........50.........60.........70.........80.........90......
 
   229230.........240.........250.........260.........270.........280.........290.
Predicted Secondary structure 

























.................
Query SS confidence 






























































. . . . . . . . . . . . . . . . .
Query Sequence  IRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKV. . . . . . . . . . . . . . . . .
Query Conservation    






   

 


               
  

      
  
  





 

    .................
Alig confidence  ..

































.........

















.................
Template Conservation  ..        
  
 



  

       
     .........   
 










 

     
    
   
 
Template Sequence  . . VTAALRVTDGALVVVDTIEGVCVQTETVLRQALG. . . . . . . . . ERIKPVVVINKVDRALLELQVSKEDLYQTFARTVE
Template Known Secondary structure  ..T
STTTBS
.........TT

TS


Template Predicted Secondary structure  ..







.........







Template SS confidence 















































































   115....120.........130.........140........ .150.........160.........170.........180...
 
   292.......300......... 310.........320 .........330.....
Predicted Secondary structure 




.......





..

Query SS confidence 

















. . . . . . .










. .














Query Sequence  EAEEKAKAIAEALGWEDK. . . . . . . YYLISAASGLG. . VKDLCWDVMTFIIEN
Query Conservation          
         .......

 


  
 
..

 
   
   
 
 
Alig confidence 

















.......










..














Template Conservation   

  
              
   

 
 

  
  
    
           
Template Sequence  SVNVIVSTYADEVLGDVQVYPARGTVAFGSGLHGWAFTIRQFATRYAKKFGVD
Template Known Secondary structure  S
GGG





GGGT
TTTTTTTTS
Template Predicted Secondary structure 























Template SS confidence 




















































   184.....190.........200.........210.........220.........230......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions