Return to main results Retrieve Phyre Job Id

Job DescriptionP42641
Confidence99.46%DateThu Jan 5 12:02:02 GMT 2012
Rank158Aligned Residues161
% Identity18%Templated1kmqa_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution1.55

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  VGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVL
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Template Sequence  LVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGLEDYDRLRPL. . . . . . . SYPDTDVI
Template Known Secondary structure  STTSSS


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STT

SGGGTTTGGG.......G
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   8.10.........20.........30.........40.........50.........60.........70.. .......80
 
   242.......250.........260.........270.........280.........290.........300 .........
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Query Sequence  LHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAI. . . . . . . . . . . . AEALGWEDK
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Template Sequence  LMCFSID. . . . . SPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFG
Template Known Secondary structure  TT.....
TSTTS

GGGTT
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   81...... ..90.........100.........110.........120.........130.........140.........150.....
 
   310.........320.........330....
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Query Sequence  YYLISAASGLGVKDLCWDVMTFIIE
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Template Sequence  YMECSAKTKDGVREVFEMATRAALQ
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   156...160.........170.........180
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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