Return to main results Retrieve Phyre Job Id

Job DescriptionP42641
Confidence99.72%DateThu Jan 5 12:02:02 GMT 2012
Rank69Aligned Residues157
% Identity19%Templated1d2ea3
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution1.94

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   162.......170.........180.........190.... .....200.........210.........220......
Predicted Secondary structure 

















...............










Query SS confidence 
































. . . . . . . . . . . . . . .































Query Sequence  VGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTL. . . . . . . . . . . . . . . VPSLGVVRMDNEKSFVVADIPGLIEGAAEGAG
Query Conservation 




 









 

  
  

  




............... 
  
 
       
 
 





  
     
Alig confidence 
































...............





















.......


Template Conservation 
 


  










                                                
  
.......   
Template Sequence  VGTIGHVDHGKTTLTAAITKILAEGGGAKFKKYEEIDNAPEERARGITINAAHVEYSTAARHYAHTDCPG. . . . . . . HAD
Template Known Secondary structure  SSTTSSTTSB



S

TT

SS

SS.......
Template Predicted Secondary structure 

































.......
Template SS confidence 















































































   60.........70.........80.........90.........100.........110.........120......... 130..
 
   227..230.........240.........250.........260.........270.........280.........290.........300...
Predicted Secondary structure 


























...
Query SS confidence 












































































. . .
Query Sequence  LGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEA. . .
Query Conservation 

  






   

 


               
  

      
  
  





 

            
   ...
Alig confidence 






































........





























...
Template Conservation                   
                     ........                                 
Template Sequence  YVKNMITGTAPLDGCILVVAANDGPMPQTREHLLLARQI. . . . . . . . GVEHVVVYVNKADAVQDSEMVELVELEIRELLT
Template Known Secondary structure  TSS

STTT
S
T........T



GGG
S
Template Predicted Secondary structure 







........














Template SS confidence 















































































   133......140.........150.........160.........170. ........180.........190.........200....
 
   304.....310........ .320.........330...
Predicted Secondary structure  ....







..........

Query SS confidence  . . . .














. . . . . . . . . .














Query Sequence  . . . . LGWEDKYYLISAASG. . . . . . . . . . LGVKDLCWDVMTFII
Query Conservation  ....      

 


  
.......... 


 
   
   
 
Alig confidence  ....














..........














Template Conservation            

 


  
            
  

  
   

Template Sequence  EFGYKGEETPIIVGSALCALEQRDPELGLKSVQKLLDAVDTYIP
Template Known Secondary structure  TTS
TTTS


TT

TTTTS
Template Predicted Secondary structure 

























Template SS confidence 











































   205....210.........220.........230.........240........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions