Return to main results Retrieve Phyre Job Id

Job DescriptionP42641
Confidence98.54%DateThu Jan 5 12:02:02 GMT 2012
Rank264Aligned Residues154
% Identity14%Templatec4a2iV_
PDB info PDB header:ribosome/hydrolaseChain: V: PDB Molecule:putative ribosome biogenesis gtpase rsga; PDBTitle: cryo-electron microscopy structure of the 30s subunit in complex with2 the yjeq biogenesis factor
Resolution16.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   164.....170.........180.........190........ .200.........210.........220.........230.........
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Query Sequence  MLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSL. . . . GVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCR
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Template Sequence  LFGEPAEG. . . IVISRFGMHADVESADGEVHRCNIRRTIRSLVTGDRVVWRPGKVKGIVEAVHETSVLTRPVKPIAANID
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...TTTTS

TT




TT

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   43......50 .........60.........70.........80.........90.........100.........110.........
 
   240.........250.........260.........270.........280.........290.........300.........310.........
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Query Sequence  VLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGL
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Template Sequence  QIVIVSAILPELSLNIIDRYLVGCET. . . . . . . . LQVEPLIVLNKIDLLDDEGMDFVNEQMDIYRNIGYRVLMVSSHTQD
Template Known Secondary structure  STTT

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GGG

TTT


BTTTTB
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   133......140.........150........ .160.........170.........180.........190.........200....
 
   320........
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Query Sequence  GVKDLCWDV
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Template Sequence  GLKPLEEAL
Template Known Secondary structure  T
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   205....210...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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