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Job DescriptionP42641
Confidence93.58%DateThu Jan 5 12:02:02 GMT 2012
Rank398Aligned Residues111
% Identity23%Templatec3r7wD_
PDB info PDB header:protein transportChain: D: PDB Molecule:gtp-binding protein gtr2; PDBTitle: crystal structure of gtr1p-gtr2p complex
Resolution2.77 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  VGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVL
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Template Sequence  VLLXGVRRCGKSSICKVVFH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AL
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   12.......20.........30. ..
 
   242.......250.........260.........270.........280.........290.........300...... ...310........
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Query Sequence  LHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGW. . . EDKYYLISAASG
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Template Sequence  VYVIDI. . . . . . NAITNLAXIIEYAYKVNPSI. . . NIEVLIHKFKVDAQRDIXQRTGEELLELGLDGVQVSFYLTSIFDH
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   87..90.. .......100.........110.. .......120.........130.........140.........150.......
 
   319320.........330.........
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Query Sequence  LGVKDLCWDVMTFIIENPVVQ
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Template Sequence  SIYEAFSRIVQKLIPELSFLE
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   170.........180.........190
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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