Job Description P42641 Confidence 99.91% Date Thu Jan 5 12:02:02 GMT 2012 Rank 23 Aligned Residues 212 % Identity 16% Template c3lx8A_ PDB info PDB header:metal transport Chain: A: PDB Molecule:ferrous iron uptake transporter protein b; PDBTitle: crystal structure of gdp-bound nfeob from s. thermophilus Resolution 2.90 Å

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		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		V	G	M	L	G	M	P	N	A	G	K	S	T	F	I	R	A	V	S	A	A	K	P	K	V	A	D	Y	P	F	T	T	L	V	P	S	L	G	V	V	R	M	D	N	E	K	S	F	V	V	A	D	I	P	G	L	I	E	G	.	A	A	E	G	A	G	L	G	I	R	F	L	K	H	L	E	R	C	R	V
Query Conservation																																																													.
Alig confidence																																										.	.																		.
Template Conservation																																										.	.
Template Sequence		I	A	L	I	G	N	P	N	S	G	K	T	S	L	F	N	L	I	T	G	H	N	Q	R	V	G	N	W	P	G	V	T	V	E	R	K	S	G	L	V	.	.	K	K	N	K	D	L	E	I	Q	D	L	P	G	I	Y	S	M	S	P	Y	S	P	E	E	K	V	A	R	D	Y	L	L	S	Q	R	A	D	S
Template Known Secondary structure							S	T	T	S	S										T	T								T	T	S	S	S								.	.	S	S		T	T										S	S			S	S	S												T	T			S
Template Predicted Secondary structure																																										.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	H	L	I	D	I	D	P	I	D	G	T	D	P	V	E	N	A	R	I	I	I	S	E	L	E	K	Y	S	Q	D	L	A	T	K	P	R	W	L	V	F	N	K	I	D	L	L	D	K	V	E	A	E	E	K	A	K	A	I	A	E	A	L	G	W	E	D	K	Y	Y	L	I	S	A	A	S	G	L	G
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.																																														.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.																																														.	.
Template Sequence		I	L	N	V	V	D	A	T	.	.	.	.	.	.	.	.	.	.	.	N	L	E	R	N	L	Y	L	T	T	Q	L	I	E	T	G	I	P	V	T	I	A	L	N	M	I	D	V	L	D	G	Q	G	K	K	I	N	V	D	K	L	S	Y	H	L	.	.	G	V	P	V	V	A	T	S	A	L	K	Q	T	G
Template Known Secondary structure								S	T	.	.	.	.	.	.	.	.	.	.	.	T													T	T	S	S																													.	.	T	S						B	T	T	T	T	B	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.																																														.	.
Template SS confidence
		82	.	.	.	.	.	.	.												90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	D	L	C	W	D	V	M	T	F	I	I	E	N	P	V	V	Q	A	E	E	A	K	Q	P	E	K	V	E	F	M	W	D	D	Y	H	R	Q	Q	L	E	E	I	A	E	E	D	D	E	D	W	D	D	D	W	D	E	D	D	E	E	G	V	E	F	I	Y	K	R
Query Conservation
Alig confidence																																		.	.
Template Conservation																																		.	.
Template Sequence		V	D	Q	V	V	K	K	A	A	H	T	T	T	S	T	V	G	D	L	A	F	P	I	Y	D	D	R	L	E	A	A	I	.	.	S	Q	I	L	E	V	L	G	N	S	V	P	Q	R	S	A	R	F	Y	A	I	K	L	F	E	Q	D	S	L	V	E	A	E	L	D	L
Template Known Secondary structure												S	S	T	T	T																		.	.								T	T	S	S		T	T	T										T	T							T	S
Template Predicted Secondary structure																																		.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions