Return to main results Retrieve Phyre Job Id

Job DescriptionP42641
Confidence99.93%DateThu Jan 5 12:02:02 GMT 2012
Rank17Aligned Residues192
% Identity23%Templatec3gehA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:trna modification gtpase mnme; PDBTitle: crystal structure of mnme from nostoc in complex with gdp, folinic2 acid and zn
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   162.......170.........180.... .....190.........200.........210.........220.........230.........240
Predicted Secondary structure 










.



















Query SS confidence 






















.























































Query Sequence  VGMLGMPNAGKSTFIRAVSAAKP. KVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV
Query Conservation 




 









 

  
 . 

  




 
  
 
       
 
 





  
     

  






   
Alig confidence 






















.






















.







...................




Template Conservation 
 


 









 
 
   



  





         
  .  
 



...................  


Template Sequence  VAIVGRPNVGKSSLLNAWSQSDRAIVTDLPGTTRDVVESQLVVGGIP. VQVLDQAA. . . . . . . . . . . . . . . . . . . NTADL
Template Known Secondary structure 
TTSSBS

S

TT

TT.




...................
S
S
Template Predicted Secondary structure 






















.

...................

Template SS confidence 















































































   224.....230.........240.........250.........260.........270 ........ .280...
 
   241........250.........260.........270.........280.........290.........300.........310.........320
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  LLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLG
Query Conservation 

 


               
  

      
  
  





 

            
         

 


  
 
Alig confidence 





















...........





















.....



















Template Conservation 

 
 
 
              ...........     
 
 

 

        .....         

 


    
Template Sequence  VLLTIDAATGWTTGDQEIYEQV. . . . . . . . . . . KHRPLILVMNKIDLVEKQLITS. . . . . LEYPENITQIVHTAAAQKQG
Template Known Secondary structure  TTT
S
...........TTS

TTSS
GGGSTT.....



TT


BTTTTBS
Template Predicted Secondary structure 





...........









.....










Template SS confidence 















































































   304.....310.........320..... ....330.........340....... ..350.........360.......
 
   321........330.........340.........350.........360.........370. ........380.........
Predicted Secondary structure 












.





Query SS confidence 


















































.

















Query Sequence  VKDLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDYHRQQLEEIAEEDDED. WDDDWDEDDEEGVEFIYK
Query Conservation 

 
   
   
 
            
          

    
  
  
 .     
   



  
 
Alig confidence 


















































.

















Template Conservation 
  
   
   
                
    
  
   
      
      

 




 
   
  
Template Sequence  IDSLETAILEIVQTGKVQAADMDLAINQRQAAALTQAKMSLEQVQATITQQLPLDFWTIDLRGAIQALGE
Template Known Secondary structure  TTSSSSS

SS



TTTT

GGGT
Template Predicted Secondary structure 













Template SS confidence 





































































   368.370.........380.........390.........400.........410.........420.........430.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions