Job Description P42641 Confidence 99.23% Date Thu Jan 5 12:02:02 GMT 2012 Rank 234 Aligned Residues 140 % Identity 16% Template c3bwdD_ PDB info PDB header:plant protein Chain: D: PDB Molecule:rac-like gtp-binding protein arac6; PDBTitle: crystal structure of the plant rho protein rop5 Resolution 1.53 Å

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		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	M	L	G	M	P	N	A	G	K	S	T	F	I	R	A	V	S	A	A	K	P	K	V	A	D	Y	P	F	T	T	L	V	P	S	L	G	V	V	R	M	D	N	E	K	S	F	V	V	A	D	I	P	G	L	I	E	G	A	A	E	G	A	G	L	G	I	R	F	L	K	H	L	E	R	C	R	V	L
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Template Sequence		C	V	T	V	G	D	G	A	V	G	K	T	C	L	L	I	S	Y	T	S	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	F	S	A	N	V	V	L	G	L	W	D	T	A	G	E	D	Y	N	R	L	R	P	L	S	.	.	.	.	.	.	.	.	Y	R	G	A	D	V	F
Template Known Secondary structure							S	T	T	S	S											S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				B														T	T	T	T	T	G	G	G	G	.	.	.	.	.	.	.	.	G	T	T		S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30																		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.									.	.	.	60	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.										.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.
Query Sequence		L	H	L	I	D	I	D	P	I	D	G	T	D	P	V	E	N	A	R	I	I	I	S	E	L	E	K	Y	S	Q	D	L	A	T	K	P	R	W	L	V	F	N	K	I	D	L	L	D	K	V	E	A	.	.	.	.	.	.	.	.	.	E	E	K	A	K	A	I	A	E	A	L	G	W	E	D	K	Y	Y	L
Query Conservation																																																						.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.																																									.	.	.	.	.	.	.	.	.														.
Template Conservation									.	.	.	.	.																																																															.
Template Sequence		I	L	A	F	S	L	I	.	.	.	.	.	S	K	A	S	Y	E	N	V	S	K	K	W	I	P	E	L	K	H	Y	A	P	G	V	P	I	V	L	V	G	T	K	L	D	L	R	D	D	K	Q	F	F	I	D	H	A	V	P	I	T	T	V	Q	G	E	E	L	K	K	L	I	G	A	.	P	A	Y	I	E
Template Known Secondary structure							T	T	.	.	.	.	.											T										T	T														T																									T		.	S
Template Predicted Secondary structure									.	.	.	.	.																																																															.
Template SS confidence
		82	.	.	.	.	.	.						.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	A	A	S	G	L	G	V	K	D	L	C	W	D	V	M	T	F	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	S	S	K	S	Q	E	N	V	K	G	V	F	D	A	A	I	R	V	V
Template Known Secondary structure				T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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