Job Description P42641 Confidence 99.39% Date Thu Jan 5 12:02:02 GMT 2012 Rank 193 Aligned Residues 149 % Identity 19% Template c3agqA_ PDB info PDB header:translation,transferase Chain: A: PDB Molecule:elongation factor ts, elongation factor tu 1, linker, q PDBTitle: structure of viral polymerase form ii Resolution 3.22 Å

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		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	M	L	G	M	P	N	A	G	K	S	T	F	I	R	A	V	S	A	A	K	P	K	V	A	D	Y	P	F	T	T	L	V	P	S	L	G	V	V	R	M	D	N	E	K	S	F	V	V	A	D	I	P	G	L	I	E	G	A	A	E	G	A	G	L	G	I	R	F	L	K	H	L	E	R	C	R	V	L
Query Conservation
Alig confidence																							.	.	.															.	.	.	.														.	.	.	.	.	.	.
Template Conservation																							.	.	.															.	.	.	.														.	.	.	.	.	.	.
Template Sequence		V	G	T	I	G	H	V	D	H	G	K	T	T	L	T	A	A	I	T	T	V	.	.	.	L	A	K	T	Y	G	G	T	S	H	V	E	Y	D	.	.	.	.	T	P	T	R	H	Y	A	H	V	D	C	P	G	.	.	.	.	.	.	.	H	A	D	Y	V	K	N	M	I	T	G	A	A	Q	M	D	G	A
Template Known Secondary structure								T	T	S	S												.	.	.	T	T	T	T	S										.	.	.	.		S	S											.	.	.	.	.	.	.											T	S				S
Template Predicted Secondary structure																							.	.	.															.	.	.	.														.	.	.	.	.	.	.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.				320	.	.	.	.	.	.	.	.	.	330	.	.	.					.	.	.	.	.	.	340	.	.	.	.	.	.								.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.								.	.	.	.	310	.	.	.
Predicted Secondary structure																																						.																													.	.	.	.	.	.	.
Query SS confidence																																						.																													.	.	.	.	.	.	.
Query Sequence		L	H	L	I	D	I	D	P	I	D	G	T	D	P	V	E	N	A	R	I	I	I	S	E	L	E	K	Y	S	Q	D	L	A	T	K	P	.	R	W	L	V	F	N	K	I	D	L	L	D	K	V	E	A	E	E	K	A	K	A	I	A	E	A	L	G	.	.	.	.	.	.	.	W	E	D	K	Y	Y	L	I
Query Conservation																																						.																													.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.					.																													.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.
Template Sequence		I	L	V	V	A	A	T	D	G	P	M	P	Q	T	R	E	H	I	L	L	G	R	Q	.	.	.	.	.	.	.	.	.	V	G	V	P	Y	I	I	V	F	L	N	K	C	D	M	V	D	D	E	E	L	L	E	L	V	E	M	E	V	R	E	L	L	S	Q	Y	D	F	P	G	D	D	T	P	I	V	R	G
Template Known Secondary structure							T	T	T		S		G	G	G										.	.	.	.	.	.	.	.	.	T	T		S										T	T		S		T	T	T												T	G	G	G	T	S		T	T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.										410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
		314	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		S	A	A	S	G	.	L	G	V	K	D	L	C	W	D	V	M	T	F	I	I
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		S	A	L	K	A	L	E	G	D	A	E	W	E	A	K	I	L	E	L	A	G
Template Known Secondary structure			T	T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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