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Job DescriptionP42641
Confidence99.78%DateThu Jan 5 12:02:02 GMT 2012
Rank45Aligned Residues165
% Identity21%Templatec2ywfA_
PDB info PDB header:translationChain: A: PDB Molecule:gtp-binding protein lepa; PDBTitle: crystal structure of gmppnp-bound lepa from aquifex aeolicus
Resolution2.24 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   154.....160.........170.........180.........190.........200.........210.........220.........230...
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Query Sequence  LELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLK
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Template Sequence  MEQKNVRNFCIIAHVDHGKSTLADRLLEYTGAIGITVKMQAVRMFYKAKDGNTYKLHLIDTPG. . . . . . . HVDFSYEVSR
Template Known Secondary structure 

GGG
TTSST






S
S
TTS




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   1........10.........20.........30.........40.........50.........60... ......70...
 
   234.....240.........250.........260.........270.........280.........290.........300.........310...
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Query Sequence  HLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLI
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Template Sequence  ALAACEGALLLIDASQGIEAQTVANFWKAVE. . . . . . . . . QDLVIIPVINKIDLPSADVDRVKKQIEEVLGLDPEEAILA
Template Known Secondary structure  T
STTT
S
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TTSTT

T


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   93......100.........110.........120... ......130.........140.........150.........160...
 
   314.....320.........330....
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Query Sequence  SAASGLGVKDLCWDVMTFIIE
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Template Sequence  SAKEGIGIEEILEAIVNRIPP
Template Known Secondary structure  BTTTTBSS

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   164.....170.........180....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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