Job Description P42641 Confidence 99.06% Date Thu Jan 5 12:02:02 GMT 2012 Rank 249 Aligned Residues 152 % Identity 20% Template c2q3hA_ PDB info PDB header:structural genomics Chain: A: PDB Molecule:ras homolog gene family, member u; PDBTitle: the crystal structure of rhoua in the gdp-bound state. Resolution 1.73 Å

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		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	M	L	G	M	P	N	A	G	K	S	T	F	I	R	A	V	S	A	A	K	P	K	V	A	D	Y	P	F	T	T	L	V	P	S	L	G	V	V	R	M	D	N	E	K	S	F	V	V	A	D	I	P	G	L	I	E	G	A	A	E	G	A	G	L	G	I	R	F	L	K	H	L	E	R	C	R	V	L
Query Conservation
Alig confidence																						.	.	.	.	.	.																		.	.																					.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.																		.	.																					.	.	.	.	.	.	.
Template Sequence		C	V	L	V	G	D	G	A	V	G	K	T	S	L	V	V	S	Y	T	T	.	.	.	.	.	.	P	T	A	F	D	N	F	S	A	V	V	S	V	D	G	R	P	.	.	V	R	L	Q	L	C	D	T	A	G	Q	D	E	F	D	K	L	R	P	L	.	.	.	.	.	.	.	C	Y	T	N	T	D	I	F
Template Known Secondary structure							S	T	T	S	S											.	.	.	.	.	.			S	S										T	T			.	.											S	T	T		S	S	S	G	G	G	.	.	.	.	.	.	.	G	G	T	T		S
Template Predicted Secondary structure																						.	.	.	.	.	.																		.	.																					.	.	.	.	.	.	.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.							.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.								.	110	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.														.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	H	L	I	D	I	D	P	I	D	G	T	D	P	V	E	N	A	R	I	I	I	S	E	L	E	K	Y	S	Q	D	L	A	T	K	P	R	W	L	V	F	N	K	I	D	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	V	E	A	E	E	K	A	K	A	I	A	E	A	L	G	W	E	D
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation									.	.	.	.	.																																																																		.
Template Sequence		L	L	C	F	S	V	V	.	.	.	.	.	S	P	S	S	F	Q	N	V	S	E	K	W	V	P	E	I	R	C	H	C	P	K	A	P	I	I	L	V	G	T	Q	S	D	L	R	E	D	V	K	V	L	I	E	L	D	K	C	K	E	K	P	V	P	E	E	A	A	K	L	L	A	E	E	I	K	.	A	A
Template Known Secondary structure							T	T	.	.	.	.	.											T										S	S	S									G	G	G	G	G										T	T	T																	T	.		S
Template Predicted Secondary structure									.	.	.	.	.																																																																		.
Template SS confidence
		125	.	.	.	.	130	.						.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y	Y	L	I	S	A	A	S	G	L	G	V	K	D	L	C	W	D	V	M	T	F	I	I	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Y	I	E	C	S	A	L	T	Q	K	N	L	K	E	V	F	D	A	A	I	V	A	G	I	Q
Template Known Secondary structure								T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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