Job Description P42641 Confidence 99.25% Date Thu Jan 5 12:02:02 GMT 2012 Rank 232 Aligned Residues 153 % Identity 16% Template c2p5sB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:ras and ef-hand domain containing; PDBTitle: rab domain of human rasef in complex with gdp Resolution 2.15 Å

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		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	M	L	G	M	P	N	A	G	K	S	T	F	I	R	A	V	S	A	A	K	P	K	V	A	D	Y	P	F	T	T	L	V	P	S	L	G	V	V	R	M	D	N	E	K	S	F	V	V	A	D	I	P	G	L	I	E	G	A	A	E	G	A	G	L	G	I	R	F	L	K	H	L	E	R	C	R	V	L
Query Conservation
Alig confidence																								.	.	.	.	.	.	.																		.																		.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.																		.																		.	.	.	.	.
Template Sequence		I	V	L	A	G	D	A	A	V	G	K	S	S	F	L	M	R	L	C	K	N	E	.	.	.	.	.	.	.	F	R	G	V	D	F	Q	M	K	T	L	I	V	D	G	E	R	.	T	V	L	Q	L	W	D	T	A	G	Q	E	R	F	R	S	I	.	.	.	.	.	A	K	S	Y	F	R	K	A	D	G	V
Template Known Secondary structure						S	S	T	T	S	S											S		.	.	.	.	.	.	.														T	T			.									T	T		T	T					.	.	.	.	.									S
Template Predicted Secondary structure																								.	.	.	.	.	.	.																		.																		.	.	.	.	.
Template SS confidence
		544	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.								.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.		.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.						600	.	.	.	.	.	.	.	.	.	610
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.						.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.
Query Sequence		L	H	L	I	D	I	D	P	I	D	G	T	D	P	V	E	N	A	R	I	I	I	S	E	L	E	K	Y	S	Q	D	L	A	T	K	P	R	W	L	V	F	N	K	I	D	L	L	.	.	.	.	.	D	K	V	E	A	E	E	K	A	K	A	I	A	E	A	L	G	W	E	D	K	Y	Y	L	I	S	A	A
Query Conservation																																																	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.																																	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.
Template Sequence		L	L	L	Y	D	V	T	.	.	.	.	.	.	.	.	C	E	K	S	F	L	N	I	R	E	W	V	D	M	I	E	D	A	A	V	P	I	M	L	V	G	N	K	A	D	I	R	D	T	A	A	T	E	G	Q	K	C	V	P	G	H	F	G	E	K	L	A	M	T	Y	G	A	L	F	C	E	T	S	A	K
Template Known Secondary structure							T	T	.	.	.	.	.	.	.	.							T																						G	G	G							T	T																	T								T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.
Template SS confidence
		618	.	620	.	.	.	.									.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	L	G	V	K	D	L	C	W	D	V	M	T	F	I	I	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	S	N	I	V	E	A	V	L	H	L	A	R	E	V	K	K	R
Template Known Secondary structure		T		T	T														T
Template Predicted Secondary structure
Template SS confidence
		693	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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