Job Description P42641 Confidence 98.29% Date Thu Jan 5 12:02:02 GMT 2012 Rank 268 Aligned Residues 104 % Identity 14% Template c2b92A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:interferon-induced guanylate-binding protein 1; PDBTitle: crystal-structure of the n-terminal large gtpase domain of human2 guanylate binding protein 1 (hgbp1) in complex with gdp/alf3 Resolution 3.20 Å

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		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.			.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																											.	.						.																	.	.																		.
Query SS confidence																											.	.						.																	.	.																		.
Query Sequence		L	A	D	V	G	M	L	G	M	P	N	A	G	K	S	T	F	I	R	A	V	S	A	A	K	.	.	P	K	V	A	D	.	Y	P	F	T	T	L	V	P	S	L	G	V	V	R	M	D	.	.	N	E	K	S	F	V	V	A	D	I	P	G	L	I	E	G	A	.	A	E	G	A	G	L	G	I	R	F	L
Query Conservation																											.	.						.																	.	.																		.
Alig confidence																											.	.						.																	.	.																		.
Template Conservation
Template Sequence		M	V	V	V	A	I	V	G	L	Y	R	T	G	K	S	Y	L	M	N	K	L	A	G	K	K	K	G	F	S	L	G	S	T	V	Q	S	H	T	K	G	I	W	M	W	C	V	P	H	P	K	K	P	G	H	I	L	V	L	L	D	T	E	G	L	G	D	V	E	K	G	D	N	Q	N	D	S	W	I	F	A
Template Known Secondary structure										B	S	S	S	S									T	T		S	S	S	S					S	S	S					S									S	S	S	T	T											B	T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	H	L	E	R	C	R	V	L	L	H	L	I	D	I	D	P	I	D	G	T	D	P	V	E	N	A	R	I	I	I	S
Query Conservation
Alig confidence																.	.
Template Conservation																.	.
Template Sequence		L	A	V	L	L	S	S	T	F	V	Y	N	S	I	.	.	G	T	I	N	Q	Q	A	M	D	Q	L	Y	Y	V	T	E
Template Known Secondary structure								S								.	.	S	S
Template Predicted Secondary structure																.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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