Job Description P42641 Confidence 99.64% Date Thu Jan 5 12:02:02 GMT 2012 Rank 90 Aligned Residues 168 % Identity 20% Template c1s0uA_ PDB info PDB header:translation Chain: A: PDB Molecule:translation initiation factor 2 gamma subunit; PDBTitle: eif2gamma apo Resolution 2.40 Å

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		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.																				.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	G	M	L	G	M	P	N	A	G	K	S	T	F	I	R	A	V	S	A	A	K	P	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	D	Y	P	F	T	T	L	V	P	S	L	G	V	V	R	M	D	N	E	K	S	F	V	V	A	D	I	P	G	L	I	E	G	A	A
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.													.	.	.	.	.	.
Template Conservation																																																															.													.	.	.	.	.	.
Template Sequence		I	G	M	V	G	H	V	D	H	G	K	T	S	L	T	K	A	L	T	G	V	W	T	D	R	G	I	S	I	R	L	G	Y	A	D	C	E	I	R	K	C	P	Q	C	G	T	Y	T	T	K	P	R	C	P	N	C	L	A	E	T	E	.	F	L	R	R	V	S	F	V	D	S	P	G	.	.	.	.	.	.
Template Known Secondary structure						S		T	T	S	S										S																						T	T	T					S	S	S	B		T	T	S			B			.											S	S	.	.	.	.	.	.
Template Predicted Secondary structure																																																															.													.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	A	G	L	G	I	R	F	L	K	H	L	E	R	C	R	V	L	L	H	L	I	D	I	D	P	I	D	G	T	D	P	V	E	N	A	R	I	I	I	S	E	L	E	K	Y	S	Q	D	L	A	T	K	P	R	W	L	V	F	N	K	I	D	L	L	D	K	V	E	A	E	E	K	A	K	A	I	A	E
Query Conservation
Alig confidence		.																																										.	.	.	.	.	.	.
Template Conservation		.																																										.	.	.	.	.	.	.
Template Sequence		.	H	E	T	L	M	A	T	M	L	S	G	A	S	L	M	D	G	A	I	L	V	I	A	A	N	E	P	C	P	Q	P	Q	T	K	E	H	L	M	A	L	E	.	.	.	.	.	.	.	I	L	G	I	D	K	I	I	I	V	Q	N	K	I	D	L	V	D	E	K	Q	A	E	E	N	Y	E	Q	I	K	E
Template Known Secondary structure		.										T	T		S			S								T	T	S		S	S													.	.	.	.	.	.	.		T	T											T	T	S	S		T	T	T	T	T	T
Template Predicted Secondary structure		.																																										.	.	.	.	.	.	.
Template SS confidence
			120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160								.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	G	W	E	D	K	Y	Y	L	I	S	A	A	S	G	L	G	V	K	D	L	C	W	D	V	M	T	F	I	I	E	N	P	V	V	Q	A	E	E	A	K	Q	P
Query Conservation
Alig confidence								.	.
Template Conservation								.	.
Template Sequence		F	V	K	G	T	I	.	.	A	E	N	A	P	I	I	P	I	N	I	D	V	L	L	K	A	I	Q	D	F	I	P	T	P	K	R	D	P	D	A	T	P	R	M	Y
Template Known Secondary structure				T	T	S	T	.	.	T	T	T																			S							T	T	S
Template Predicted Secondary structure								.	.
Template SS confidence
		192	.	.	.	.	.			.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions