Job Description P42641 Confidence 99.97% Date Thu Jan 5 12:02:02 GMT 2012 Rank 7 Aligned Residues 172 % Identity 31% Template c1ni3A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:ychf gtp-binding protein; PDBTitle: structure of the schizosaccharomyces pombe ychf gtpase Resolution 2.80 Å

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		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.																	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																									.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	G	M	L	G	M	P	N	A	G	K	S	T	F	I	R	A	V	S	A	A	K	P	.	K	V	A	D	Y	P	F	T	T	L	V	P	S	L	G	V	V	R	M	D	N	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	F	V	V	A	D	I	P	G	L	I	E	G	A	A	E	G
Query Conservation																									.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	G	I	V	G	X	P	N	V	G	K	S	T	F	F	R	A	I	T	K	S	V	L	G	N	P	A	N	Y	P	Y	A	T	I	D	P	E	E	A	K	V	A	V	P	D	E	R	F	D	W	L	C	E	A	Y	K	P	K	S	R	V	P	A	F	L	T	V	F	D	I	A	G	L	T	K	G	A	S	T	G
Template Known Secondary structure								S	S	S	S											S	T	T	T	S	T	T			S	S					T	T																					S												T	G	G	G						S	S
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.								.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	L	G	I	R	F	L	K	H	L	E	R	C	R	V	L	L	H	L	I	D	I	D	P	I	D	G	.	.	.	.	.	.	.	T	D	P	V	E	N	A	R	I	I	I	S	E	L	E	K	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																														.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	G	L	G	N	A	F	L	S	H	V	R	A	V	D	A	I	Y	Q	V	V	R	A	F	D	D	A	E	I	I	H	V	E	G	D	V	D	P	I	R	D	L	S	I	I	V	D	E	L	L	I	K	D	A	E	F	V	E	K	H	L	E	G	L	R	K	I	T	S	R	G	A	N	T	L	E	X	K	A	K
Template Known Secondary structure		S	S	S									T	T		S											T	T		S	S			S	S	S	S																															T	T			S	S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
																																						270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.				.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Q	D	L	A	T	K	P	R	W	L	V	F	N	K	I	D	L	.	.	.	L	D	K	V	E	A	E	E	K	A	K	A	I	A	E	A	L	G	W	E	D	K	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation
Template Sequence		K	E	E	Q	A	I	I	E	K	V	Y	Q	Y	L	T	E	T	K	Q	P	I	R	K	G	D	W	S	N	R	E	V	E	I	I	N	S	L	Y	L	L	T	A	K	P	V	I	Y	L	V	N	X	S	E	R	D	F	L	R	Q	K	N	K	Y	L	P	K	I	K	K	W	I	D	E	N	S	P	G	D	T	L
Template Known Secondary structure																	T	T		S		G	G	G	S												T	T			G	G	G	S														T	T	T			S	S										T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		311	.	.	.	.	.	.																						.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	L	I	S	A	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	G	V	K	D	L	C	W	D	V	M	T	F	I	I
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	P	X	S	V	A	F	E	E	R	L	T	N	F	T	E	E	E	A	I	E	E	C	K	K	L	N	T	K	S	X	L	P	K	I	I	V	T	G	Y	N	A	L	N
Template Known Secondary structure													T	T	S												T	T				S												T	T
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions