Job Description P42641 Confidence 100.00% Date Thu Jan 5 12:02:02 GMT 2012 Rank 2 Aligned Residues 340 % Identity 48% Template c1lnzA_ PDB info PDB header:cell cycle Chain: A: PDB Molecule:spo0b-associated gtp-binding protein; PDBTitle: structure of the obg gtp-binding protein Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	D	E	A	S	I	L	V	V	A	G	D	G	G	N	G	C	V	S	F	R	R	E	K	Y	I	P	K	G	G	P	D	G	G	D	G	G	D	G	G	D	V	W	M	E	A	D	E	N	L	N	T	L	I	D	Y	R	F	E	K	S	F	R	A	E	R	G	Q	N	G	A	S	R	D	C	T	G	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	V	D	Q	V	K	V	Y	V	K	G	G	D	G	G	N	G	X	V	A	F	R	R	E	K	Y	V	P	K	G	G	P	A	G	G	D	G	G	K	G	G	D	V	V	F	E	V	D	E	G	L	R	T	L	X	D	F	R	Y	K	K	H	F	K	A	I	R	G	E	H	G	X	S	K	N	Q	H	G	R	N
Template Known Secondary structure																						B				S	S	S					B																	T	T				S		G	G	G	T														S	T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	D	V	T	I	K	V	P	V	G	T	R	V	I	D	Q	G	T	G	E	T	M	G	D	M	T	K	H	G	Q	R	L	L	V	A	K	G	G	W	H	G	L	G	N	T	R	F	K	S	S	V	N	R	T	P	R	Q	K	T	N	G	T	P	G	D	K	R	E	L	L	L	E	L	M	L	L	A	D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	D	X	V	I	K	V	P	P	G	T	V	V	T	D	D	D	T	K	Q	V	I	A	D	L	T	E	H	G	Q	R	A	V	I	A	R	G	G	R	G	G	R	G	N	S	R	F	A	T	P	A	N	P	A	P	Q	L	S	E	N	G	E	P	G	K	E	R	Y	I	V	L	E	L	K	V	L	A	D	V
Template Known Secondary structure											T	T						T	T	T									S	T	T															G	G	G	S		B	T	T	B	S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	L	G	M	P	N	A	G	K	S	T	F	I	R	A	V	S	A	A	K	P	K	V	A	D	Y	P	F	T	T	L	V	P	S	L	G	V	V	R	M	D	N	E	K	S	F	V	V	A	D	I	P	G	L	I	E	G	A	A	E	G	A	G	L	G	I	R	F	L	K	H	L	E	R	C	R	V	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	V	G	F	P	S	V	G	K	S	T	L	L	S	V	V	S	S	A	K	P	K	I	A	D	Y	H	F	T	T	L	V	P	N	L	G	X	V	E	T	D	D	G	R	S	F	V	X	A	D	L	P	G	L	I	E	G	A	H	Q	G	V	G	L	G	H	Q	F	L	R	H	I	E	R	T	R	V	I	V
Template Known Secondary structure					S	S	T	T	S	S								S								S	S	T	T	S	S												S	S	S															T	T		T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	I	D	I	D	P	I	D	G	T	D	P	V	E	N	A	R	I	I	I	S	E	L	E	K	Y	S	Q	D	L	A	T	K	P	R	W	L	V	F	N	K	I	D	L	L	D	K	V	E	A	E	E	K	A	K	A	I	A	E	A	L	G	W	E	D	K	Y	Y	L	I	S	A	A	S	G	L	G	V	K
Query Conservation
Alig confidence																																																				.	.	.
Template Conservation																																																				.	.	.
Template Sequence		H	V	I	D	X	S	G	L	E	G	R	D	P	Y	D	D	Y	L	T	I	N	Q	E	L	S	E	Y	N	L	R	L	T	E	R	P	Q	I	I	V	A	N	K	X	D	X	P	E	A	A	E	.	.	.	N	L	E	A	F	K	E	K	L	T	D	D	Y	P	V	F	P	I	S	A	V	T	R	E	G	L	R
Template Known Secondary structure						S	S		S	S																		S		S	S	T	T	T	S		B		B					T	T	S	T	T				.	.	.											S				B				S	S			S	S	T	T
Template Predicted Secondary structure																																																				.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.				.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	C	W	D	V	M	T	F	I	I	E	N	P	V	V	Q	A	E	E	A	K	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	L	F	E	V	A	N	Q	L	E	N	T	P	E	F	P	L	Y	D	E	E	E
Template Known Secondary structure												T	S						S	S		S
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions