Job Description P42641 Confidence 97.96% Date Thu Jan 5 12:02:02 GMT 2012 Rank 274 Aligned Residues 85 % Identity 16% Template c1f5nA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:interferon-induced guanylate-binding protein 1; PDBTitle: human guanylate binding protein-1 in complex with the gtp2 analogue, gmppnp. Resolution 1.70 Å

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		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.			.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																											.	.						.																	.	.																.
Query SS confidence																											.	.						.																	.	.																.
Query Sequence		L	A	D	V	G	M	L	G	M	P	N	A	G	K	S	T	F	I	R	A	V	S	A	A	K	.	.	P	K	V	A	D	.	Y	P	F	T	T	L	V	P	S	L	G	V	V	R	M	D	.	.	N	E	K	S	F	V	V	A	D	I	P	G	L	I	E	.	G	A	A	E	G	A	G	L	G	I	R	F	L
Query Conservation																											.	.						.																	.	.																.
Alig confidence																											.	.						.																	.	.																.
Template Conservation
Template Sequence		M	V	V	V	A	I	V	G	L	Y	R	T	G	K	S	Y	L	M	N	K	L	A	G	K	K	K	G	F	S	L	G	S	T	V	Q	S	H	T	K	G	I	W	M	W	C	V	P	H	P	K	K	P	G	H	I	L	V	L	L	D	T	E	G	L	G	D	V	E	K	G	D	N	Q	N	D	S	W	I	F	A
Template Known Secondary structure										B	T	T	S	S									T	T		S	S		S					S	S	S					S									S	S	S	T	T											B			G	G	G				T	T
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	H	L	E	R	C	R	V	L	L	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	V	L	L	S	S	T	F	V	Y
Template Known Secondary structure								S
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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