Job Description P20966 Confidence 55.92% Date Thu Jan 5 11:37:49 GMT 2012 Rank 50 Aligned Residues 76 % Identity 17% Template c3k9cA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, laci family protein; PDBTitle: crystal structure of laci transcriptional regulator from rhodococcus2 species. Resolution 2.14 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170				.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.																																						.													.	.	.
Query SS confidence																			.	.																																						.													.	.	.
Query Sequence		R	V	V	A	V	T	A	C	P	T	G	V	A	H	T	F	M	.	.	A	A	E	A	I	E	T	E	A	K	K	R	G	W	W	V	K	V	E	T	R	G	S	V	G	A	G	N	A	I	T	P	E	E	V	A	A	.	A	D	L	V	I	V	A	A	D	I	E	V	.	.	.	D	L	A	K	F	A	G	K
Query Conservation																			.	.																																						.													.	.	.
Alig confidence								.	.			.							.	.																																						.													.	.	.
Template Conservation								.	.			.
Template Sequence		R	L	L	G	V	V	.	.	F	E	.	L	Q	Q	P	F	H	G	D	L	V	E	Q	I	Y	A	A	A	T	R	R	G	Y	D	V	X	L	S	A	V	A	P	S	R	A	E	K	V	A	V	Q	A	L	X	R	E	R	C	E	A	A	I	L	L	G	T	R	F	D	T	D	E	L	G	A	L	A	D	R	V
Template Known Secondary structure								.	.			.	T	T																		T	T									B	T	T	B										T	T	T	T								T													T	T	S
Template Predicted Secondary structure								.	.			.
Template SS confidence
		72	.	.	.	.	.			.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		179	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	Y	R	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	L	V	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions