Job Description P20966 Confidence 56.06% Date Thu Jan 5 11:37:49 GMT 2012 Rank 49 Aligned Residues 171 % Identity 16% Template c3hd6A_ PDB info PDB header:membrane protein, transport protein Chain: A: PDB Molecule:ammonium transporter rh type c; PDBTitle: crystal structure of the human rhesus glycoprotein rhcg Resolution 2.10 Å

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		238	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.			.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																.																																										.	.
Query SS confidence																.																																										.	.
Query Sequence		L	P	M	V	V	A	G	G	L	C	I	A	L	S	.	F	A	F	G	I	E	A	F	K	E	P	G	T	L	A	A	A	L	M	Q	I	G	G	G	S	A	F	A	L	M	V	P	V	L	A	G	Y	I	A	F	S	.	.	I	A	D	R	P	G	L	T	P	G	L	I	G	G	M	L	A	V	S	T	G	S
Query Conservation																.																																										.	.
Alig confidence																.																																										.	.
Template Conservation
Template Sequence		D	L	F	A	M	I	G	T	L	F	L	W	M	Y	W	P	S	F	N	S	A	I	S	Y	H	G	D	S	Q	H	R	A	A	I	N	T	Y	C	S	L	A	A	C	V	L	T	S	V	A	I	S	S	A	L	H	K	K	G	K	L	D	M	V	H	I	Q	N	A	T	L	A	G	G	V	A	V	G	T	A	A
Template Known Secondary structure																				T	T	T	T		S	S																													T	S	T	T											G	G	G						T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
														315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	G	F	I	G	G	I	I	A	G	F	L	A	G	Y	I	A	K	L	I	S	T	Q	L	K	L	P	Q	S	M	E	A	L	K	P	I	L	I	I	P	L	I	S	S	L	V	V	G	L	A	M	I	Y	L	I	G	K	P	V	A	G	I	L	E	G	L	T	H	W
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	M	M	L	M	P	Y	G	A	L	I	I	G	F	V	C	G	I	I	S	T	L	G	F	V	Y	L	T	P	F	L	E	S	R	L	H	I	Q	D	T	C	G	I	N	N	L	H	G	I	P	G	I	I	G	G	I	V	G	A	V	T	A	A	S	D	W	T	A	R	T	Q	G	K	F	Q	I	Y	G	L	L
Template Known Secondary structure		T	T		S																																				T	T						T
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	T	M	G	T	A	N	A	V	L	L	G	A	I	L	G	G	M	M	C	T	D	M	G	G	P	V	N
Query Conservation
Alig confidence								.	.	.
Template Conservation								.	.	.
Template Sequence		V	T	L	A	M	A	.	.	.	L	M	G	G	I	I	V	G	L	I	L	R	L	P	F	W	G	Q	P	S
Template Known Secondary structure								.	.	.												T	S	T	T	S
Template Predicted Secondary structure								.	.	.
Template SS confidence
		400	.	.	.	.	.				.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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