Job Description P20966 Confidence 65.52% Date Thu Jan 5 11:37:49 GMT 2012 Rank 43 Aligned Residues 112 % Identity 18% Template c3edoA_ PDB info PDB header:flavoprotein Chain: A: PDB Molecule:putative trp repressor binding protein; PDBTitle: crystal structure of flavoprotein in complex with fmn2 (yp_193882.1) from lactobacillus acidophilus ncfm at 1.203 a resolution Resolution 1.20 Å

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		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.																				.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	G	P	K	R	V	V	A	V	T	A	C	P	T	G	V	A	H	T	F	M	A	A	E	A	I	E	T	E	A	K	K	R	G	W	W	V	K	V	E	T	R	G	S	V	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	A	I	T	P	E	E	V	A	A	A	D	L
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.
Template Sequence		G	X	A	K	K	T	L	I	L	Y	Y	S	W	S	G	.	.	E	T	K	K	X	A	E	K	I	N	S	E	I	K	D	S	E	L	K	E	V	K	V	S	E	G	T	F	D	A	D	Y	K	T	S	D	I	A	L	D	Q	I	Q	G	N	K	D	F	P	E	I	Q	L	D	N	I	D	Y	N	N	Y	D	L
Template Known Secondary structure														S	S	S	.	.													S	T	T							B			T	T	S	S															T	T	S	S						B						G	G	G		S
Template Predicted Secondary structure																	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.			.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.												170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.													.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.													.	.
Query Sequence		V	I	V	A	A	D	I	E	.	.	.	.	.	.	.	.	.	.	.	V	D	L	A	K	F	A	G	K	P	M	Y	.	.	R	T	S	T	G	L	A	L	K	K	T	A	Q	E	L	D	K	A	V	A	E	A	T	P	Y	E	P	A	G	K	A	Q	T
Query Conservation										.	.	.	.	.	.	.	.	.	.	.													.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation
Template Sequence		I	L	I	G	S	P	V	W	S	G	Y	P	A	T	P	I	K	T	L	L	D	Q	X	K	N	Y	R	G	E	V	A	S	F	F	T	S	A	G	T	N	H	K	A	Y	V	S	H	F	N	E	W	A	D	G	L	N	V	I	G	V	A	R	D	D	S	E
Template Known Secondary structure										T	T				T									T	T	T			S									S	S														T	T	T	S								T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions