Job Description P20966 Confidence 56.26% Date Thu Jan 5 11:37:49 GMT 2012 Rank 48 Aligned Residues 123 % Identity 20% Template c3c1iA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonia channel; PDBTitle: substrate binding, deprotonation and selectivity at the2 periplasmic entrance of the e. coli ammonia channel amtb Resolution 2.30 Å

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		238	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		L	P	M	V	V	A	G	G	L	C	I	A	L	S	.	.	F	A	F	G	I	E	A	F	K	E	P	G	T	L	A	A	A	L	M	Q	I	G	G	G	S	A	F	A	L	M	V	P	V	L	A	G	Y	I	A	F	S	I	A	D	R	P	G	L	T	P	G	L	I	G	G	M	L	A	V	S	T	G	S	G
Query Conservation																.	.
Alig confidence																.	.
Template Conservation
Template Sequence		L	P	M	V	F	T	G	T	A	I	L	Y	I	G	W	F	G	A	N	A	G	S	A	G	T	A	N	E	I	A	A	L	A	F	V	N	T	V	V	A	T	A	A	A	I	L	G	W	I	F	G	E	W	A	L	R	G	K	P	S	L	L	G	A	C	S	G	A	I	A	G	L	V	G	V	T	P	A	C	G
Template Known Secondary structure																							T	T	S	S	S	S																														S	S																		T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		316	.				.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure				.	.	.
Query SS confidence				.	.	.
Query Sequence		F	I	.	.	.	G	G	I	I	A	G	F	L	A	G	Y	I	A	K	L	I	S	T	Q	L	K	L	P	Q	S	M	E	A	L	K	P	I	L	I	I	P	L	I	S	S	L	V	V	G	L	A
Query Conservation				.	.	.
Alig confidence				.	.	.																.	.	.
Template Conservation																						.	.	.
Template Sequence		Y	I	G	V	G	G	A	L	I	I	G	V	V	A	G	L	A	G	L	W	.	.	.	G	V	T	M	D	D	P	C	D	V	F	G	V	H	G	V	C	G	I	V	G	C	I	M	T	G	I	F
Template Known Secondary structure		T	S																			.	.	.							G	G	G
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.				.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions