Job Description P52138 Confidence 17.26% Date Thu Jan 5 12:05:42 GMT 2012 Rank 12 Aligned Residues 26 % Identity 35% Template c1pi7A_ PDB info PDB header:viral protein Chain: A: PDB Molecule:vpu protein; PDBTitle: structure of the channel-forming trans-membrane domain of2 virus protein "u" (vpu) from hiv-1 Resolution UNK

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		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	I	P	L	V	S	A	I	I	I	A	I	L	I	T	A	V	I	Y	L	L	F	A	R	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	V	A	L	V	V	A	I	I	I	A	I	V	V	W	S	I	V	X	X	X	X	X	X	X
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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