Return to main results Retrieve Phyre Job Id

Job DescriptionP52138
Confidence9.53%DateThu Jan 5 12:05:42 GMT 2012
Rank99Aligned Residues18
% Identity39%Templatec1p0gA_
PDB info PDB header:ribosomeChain: A: PDB Molecule:19-mer peptide from 50s ribosomal protein l1; PDBTitle: structure of antimicrobial peptide, hp (2-20) and its2 analogues derived from helicobacter pylori, as determined3 by 1h nmr spectroscopy
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   437..440.........450....
Predicted Secondary structure 




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Query Sequence  KKTYQKLDKIYDDISNGK
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Template Sequence  KKVFKRLEKLFSKIQNDK
Template Predicted Secondary structure 


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   2.......10.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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