Job Description P52138 Confidence 14.19% Date Thu Jan 5 12:05:42 GMT 2012 Rank 21 Aligned Residues 33 % Identity 21% Template c1no7A_ PDB info PDB header:viral protein Chain: A: PDB Molecule:major capsid protein; PDBTitle: structure of the large protease resistant upper domain of2 vp5, the major capsid protein of herpes simplex virus-1 Resolution 2.90 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	V	L	F	Q	Y	F	T	A	A	F	T	K	G	N	C	Y	E	C	S	M	K	L	D	Y	I	K	Q	F	Y	F	S	L	E	T
Query Conservation
Alig confidence																			.	.								.
Template Conservation																			.	.								.
Template Sequence		H	K	I	Y	Y	Y	V	M	V	P	A	F	S	R	G	R	C	.	.	C	T	A	G	V	R	F	.	D	R	V	Y	A	T	L	Q	N
Template Known Secondary structure								T							T	T			.	.								.								T
Template Predicted Secondary structure																			.	.								.
Template SS confidence
		809	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.			.	.	.	.	830	.	.		.	.	.	.	.	.	.	840	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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