Job Description P37685 Confidence 100.00% Date Thu Jan 5 11:57:00 GMT 2012 Rank 36 Aligned Residues 447 % Identity 32% Template c3pqaA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:lactaldehyde dehydrogenase; PDBTitle: crystal structure of glyceraldehyde-3-phosphate dehydrogenase gapn2 from methanocaldococcus jannaschii dsm 2661 Resolution 1.50 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	E	Y	Y	Q	N	L	T	P	V	T	G	Q	L	L	C	E	V	A	S	S	G	K	R	D	I	D	L	A	L	D	A	A	H	K	V	K	D	K	W	A	H	T	S	V	Q	D	R	A	A	I	L	F	K	I	A	D	R	M	E	Q	N	L	E	L	L	A	T	A	E	T	W	D	N	G	K	P	I	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	R	E	D	M	D	V	I	N	P	Y	S	L	E	V	I	K	K	I	P	A	L	S	R	E	E	A	K	E	A	I	D	T	A	E	K	Y	K	E	V	M	K	N	L	P	I	T	K	R	Y	N	I	L	M	N	I	A	K	Q	I	K	E	K	K	E	E	L	A	K	I	L	A	I	D	A	G	K	P	I	K
Template Known Secondary structure											T	T	T																									T						T																				T
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	S	A	A	D	V	P	L	A	I	D	H	F	R	Y	F	A	S	C	I	R	A	Q	E	G	G	I	S	E	V	D	S	E	T	V	A	Y	H	F	H	E	P	L	G	V	V	G	Q	I	I	P	W	N	F	P	L	L	M	A	S	W	K	M	A	P	A	L	A	A	G	N	C	V	V	L	K	P	A	R
Query Conservation
Alig confidence					.																					.
Template Conservation					.																					.
Template Sequence		Q	A	R	.	V	E	V	E	R	S	I	G	T	F	K	L	A	A	F	Y	V	K	E	H	.	R	D	E	V	I	P	S	D	D	R	L	I	F	T	R	R	E	P	V	G	I	V	G	A	I	T	P	F	N	F	P	L	N	L	S	A	H	K	I	A	P	A	I	A	T	G	N	V	I	V	H	H	P	S	S
Template Known Secondary structure					.																					.								T	T											S								S	S	S															T	T									T
Template Predicted Secondary structure					.																					.
Template SS confidence
		90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.						.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																		.	.	.	.	.
Query SS confidence																		.	.	.	.	.
Query Sequence		L	T	P	L	S	V	L	L	L	M	E	I	V	G	D	L	.	.	.	.	.	L	P	P	G	V	V	N	V	V	N	G	A	G	G	V	I	G	E	Y	L	A	T	S	K	R	I	A	K	V	A	F	T	G	S	T	E	V	G	Q	Q	I	M	Q	Y	A	T	Q	N	I	I	P	V	T	L	E	L	G	G	K
Query Conservation																		.	.	.	.	.
Alig confidence																		.	.	.	.	.																																															.	.
Template Conservation																																																																					.	.
Template Sequence		K	A	P	L	V	C	I	E	L	A	K	I	I	E	N	A	L	K	K	Y	N	V	P	L	G	V	Y	N	L	L	T	G	A	G	E	V	V	G	D	E	I	V	V	N	E	K	V	N	M	I	S	F	T	G	S	S	K	V	G	E	L	I	T	K	K	A	G	.	.	F	K	K	I	A	L	E	L	G	G	V
Template Known Secondary structure		T	S																		T	T			G	G	G						S		T	T	T									T	T								S														.	.	S	S
Template Predicted Secondary structure																																																																					.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.			.	.	.	.	.	240	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.		.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		S	P	N	I	F	F	A	D	V	M	D	E	E	D	A	F	F	D	K	A	L	E	G	F	A	L	F	A	F	.	N	Q	G	E	V	C	T	C	P	S	R	A	L	V	Q	E	S	I	Y	E	R	F	M	E	R	A	I	R	R	V	E	S	I	R	S	G	N	P	L	D	S	V	T	Q	M	G	A	Q	V	S
Query Conservation																															.
Alig confidence										.	.	.	.	.	.																.
Template Conservation										.	.	.	.	.	.
Template Sequence		N	P	N	I	V	L	K	D	.	.	.	.	.	.	A	D	L	N	K	A	V	N	A	L	I	K	G	S	F	I	Y	A	G	Q	V	C	I	S	V	G	M	I	L	V	D	E	S	I	A	D	K	F	I	E	M	F	V	N	K	A	K	V	L	N	V	G	N	P	L	D	E	K	T	D	V	G	P	L	I	S
Template Known Secondary structure								T	T	.	.	.	.	.	.	S															G	G	G	G		S	T	T	S								G	G	G														T			B	S		T	T	S	T	T		S	B				S
Template Predicted Secondary structure										.	.	.	.	.	.
Template SS confidence
		246	.	.	.	250	.	.	.							.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	Q	L	E	T	I	L	N	Y	I	D	I	G	K	K	E	G	A	D	V	L	T	G	G	R	R	K	L	L	E	G	E	L	K	D	G	Y	Y	L	E	P	T	I	L	F	G	Q	N	N	M	R	V	F	Q	E	E	I	F	G	P	V	L	A	V	T	T	F	K	T	M	E	E	A	L	E	L	A	N	D
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.																																		.
Template Conservation																															.	.	.	.	.	.	.	.																																		.
Template Sequence		V	E	H	A	E	W	V	E	K	V	V	E	K	A	I	D	E	G	G	K	L	L	L	G	G	K	R	D	K	.	.	.	.	.	.	.	.	A	L	F	Y	P	T	I	L	E	V	D	R	D	N	I	L	C	K	T	E	T	F	A	P	V	I	P	I	I	R	T	N	E	.	E	E	M	I	D	I	A	N	S
Template Known Secondary structure																		T	T											T	.	.	.	.	.	.	.	.	T											T	T	S	G	G	G	T					S	S										.								T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.																																		.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.									.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.		.	.	.	.	.	.	.	.	390
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		T	Q	Y	G	L	G	A	G	V	W	S	R	N	G	N	L	A	Y	K	M	G	R	G	I	Q	A	G	R	V	W	T	N	C	Y	H	A	Y	P	.	A	H	A	A	F	G	G	Y	K	Q	S	G	I	G	R	E	T	H	K	M	M	L	E	H	Y	Q	Q	T	K	C	L	L	V	S
Query Conservation																																								.
Alig confidence																																								.
Template Conservation
Template Sequence		T	E	Y	G	L	H	S	A	I	F	T	N	D	I	N	K	S	L	K	F	A	E	N	L	E	F	G	G	V	V	I	N	D	S	S	L	F	R	Q	D	N	M	P	F	G	G	V	K	K	S	G	L	G	R	E	G	V	K	Y	A	M	E	E	M	S	N	I	K	T	I	I	I	S
Template Known Secondary structure		S	S			S							S												S		S	S					S	S		T	T				T	T	S		B			S	G	G	G			S		B	S								T
Template Predicted Secondary structure
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.