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Job DescriptionP37685
Confidence100.00%DateThu Jan 5 11:57:00 GMT 2012
Rank18Aligned Residues469
% Identity34%Templatec3ek1C_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:aldehyde dehydrogenase; PDBTitle: crystal structure of aldehyde dehydrogenase from brucella2 melitensis biovar abortus 2308
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60.........70.........80.........90.........100...
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Query Sequence  RYDNFIGGEWVAPADGEYYQNLTPVTGQLLCEVASSGKRDIDLALDAAHKVKDKWAHTSVQDRAAILFKIADRMEQNLEL
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Template Sequence  KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADD
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SSTT

TT


TTT




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T
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   11........20.........30.........40.........50.........60.........70.........80.........90
 
   104.....110.........120.........130.........140..... ....150.........160.........170.........180..
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Query Sequence  LATAETWDNGKPIRETSAADVPLAIDHFRYFASCIRAQEGGI. SEVDSETVAYHFHEPLGVVGQIIPWNFPLLMASWKMA
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Template Sequence  IALIMTSEQGKPLAEAR. GEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAA
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.TT




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   91........100....... ..110.........120.........130.........140.........150.........160.........
 
   183......190.........200.........210... ......220.........230.........240.........250.........260.
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Query Sequence  PALAAGNCVVLKPARLTPLSVLLLMEIVGDL. LPPGVVNVVNGAGGVIGEYLATSKRIAKVAFTGSTEVGQQIMQYATQN
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Template Sequence  PALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPT
Template Known Secondary structure  T


TTST

TTT

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GGG
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   170.........180.........190.........200.........210.........220.........230.........240.........
 
   262.......270.........280.........290.........300. ........310.........320.........330.........340
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Query Sequence  IIPVTLELGGKSPNIFFADVMDEEDAFFDKALEGFALFAF. NQGEVCTCPSRALVQESIYERFMERAIRRVESIRSGNPL
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Template Sequence  IKRISLELGGNAPFIVFDD. . . . . . ADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGT
Template Known Secondary structure  T





TT......S
GGGG
STTST

BS
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   250.........260........ .270.........280.........290.........300.........310.........320...
 
   341........350.........360.........370.........380.........390.........400.........410.........420
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Query Sequence  DSVTQMGAQVSHGQLETILNYIDIGKKEGADVLTGGRRKLLEGELKDGYYLEPTILFGQNNMRVFQEEIFGPVLAVTTFK
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Template Sequence  EPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGK. . . . . . ELGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFD
Template Known Secondary structure  STT

B


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TT


S......B
STT
B


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   324.....330.........340.........350.........360 .........370.........380.........390.......
 
   421........430.........440.........450.........460.........470.........480.........490.........500
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Query Sequence  TMEEALELANDTQYGLGAGVWSRNGNLAYKMGRGIQAGRVWTNCYHAYPAHAAFGGYKQSGIGRETHKMMLEHYQQTKCL
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Template Sequence  TEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYI
Template Known Secondary structure 
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S
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SSS
B

SGGGS
BSTTTSGGGG
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   398.400.........410.........420.........430.........440.........450.........460.........470.......
 
   501....
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Query Sequence  LVSYS
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Template Sequence  CSAYK
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   478.480..
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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