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Job DescriptionP37685
Confidence100.00%DateThu Jan 5 11:57:00 GMT 2012
Rank31Aligned Residues477
% Identity23%Templatec2vroB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:aldehyde dehydrogenase; PDBTitle: crystal structure of aldehyde dehydrogenase from2 burkholderia xenovorans lb400
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60.........70.........80.........90.........100
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Query Sequence  LKARYDNFIGGEWVAPADGEYYQNLTPVTGQLLCEVASSGKRDIDLALDAAHKVKDKWAHTSVQDRAAILFKIADRMEQN
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Template Sequence  MTELLKNHVAGQWIAG. TGAGITLTDPVTGVALVRVSSEGLDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAK
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TT

.SSS

TTT



TT

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T
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   1........10...... ...20.........30.........40.........50.........60.........70.........
 
   101........110.........120.........130.........140.... .....150.........160.........170
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Query Sequence  LELLATAETWDNGKPIRETSAADVPLAIDHFRYFASCIRAQEGG. . . . . . . . . . ISEVDSETVAYHFHEPLGVVGQIIPW
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Template Sequence  RGDYYAIATANSGTTRNDSA. VDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAF
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T
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   80.........90......... 100.........110.........120.........130.........140.........150........
 
   171........180.........190.........200.........210.. .......220.........230.........240........
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Query Sequence  NFPLLMASWKMAPALAAGNCVVLKPARLTPLSVLLLMEIVGD. . LLPPGVVNVVNGAGGVIGEYLATSKRIAKVAFTGST
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Template Sequence  NFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAG. . . LLDQIRSFDVVSFTGSA
Template Known Secondary structure  T
TTTT



GGGT
S
TTS

S

TT...TGGG

TT
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   159160.........170.........180.........190.........200.........210........ .220.........230.....
 
   249250......... 260.........270.........280.........290.........300. ........310.........320.....
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Query Sequence  EVGQQIMQYAT. . QNIIPVTLELGGKSPNIFFADVMDEEDAFFDKALEGFALFAF. NQGEVCTCPSRALVQESIYERFME
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Template Sequence  DTAATLRAHPAFVQRGARLNVEADSLNSAILCADATPDT. PAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLE
Template Known Secondary structure  TSTT






TT

TTS.GGGG

TT
GGG
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   236...240.........250.........260.........270.... .....280.........290.........300.........310....
 
   326...330.........340.........350.........360.........370.........380.........390...... ...400..
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Query Sequence  RAIRRVESIRSGNPLDSVTQMGAQVSHGQLETILNYIDIGKKEGADVLTGGRRKLLEGELKDGYYLEPTIL. . . FGQNNM
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Template Sequence  ALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNAT
Template Known Secondary structure  TT

BB
TTSTT
SB


S
TTS
TTS

BSS
TTTS





S
TTT
S
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   315....320.........330.........340.........350.........360.........370.........380.........390....
 
   403......410.........420 .........430.........440.........450.........460... ....
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Query Sequence  RVFQEEIFGPVLAVTTFK. . . . TMEEALELANDTQYGLGAGVWSRNGNLAYKMGRGIQAGRVWTN. . . . . . . . . . . CYHA
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Template Sequence  LLHDVEVFGPVASVAPYRVTALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGN
Template Known Secondary structure  STTT



SS




TTTTSS
S
TTT
GGGTTT


SS
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   395....400.........410.........420.........430.........440.........450.........460.........470....
 
   468.470.........480....... ..490.........500...
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Query Sequence  YPAHAAFGGYKQSGIGRETH. KMMLEHYQQTKCLLVS
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Template Sequence  VMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAA
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TTS

SGGG
S

SGGGGGGGG
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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