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Job DescriptionP37685
Confidence100.00%DateThu Jan 5 11:57:00 GMT 2012
Rank9Aligned Residues476
% Identity38%Templatec2o2qA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:formyltetrahydrofolate dehydrogenase; PDBTitle: crystal structure of the c-terminal domain of rat2 10'formyltetrahydrofolate dehydrogenase in complex with nadp
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50.........60.........70....... ..80.........90......
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Query Sequence  LKLKARYDNFIGGEWVAPADGEYYQNLTPVTGQLLCEVASSGKRDIDLALDAAHKVKDK. . WAHTSVQDRAAILFKIADR
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Template Sequence  LTLQMPYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADV
Template Known Secondary structure 

STT

GGG

TTT




TSGGGTS
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   416...420.........430.........440.........450.........460.........470.........480.........490.....
 
   97..100.........110.........120.........130.........140.........150 .........160.........170..
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Query Sequence  MEQNLELLATAETWDNGKPIRETSAADVPLAIDHFRYFASCIRAQEGGISEVDS. . . . ETVAYHFHEPLGVVGQIIPWNF
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Template Sequence  MEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNY
Template Known Secondary structure  T


TTTGGG








TTS




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   496...500.........510.........520.........530.........540.........550.........560.........570.....
 
   173......180.........190.........200.........210... ......220.........230.........240.........250.
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Query Sequence  PLLMASWKMAPALAAGNCVVLKPARLTPLSVLLLMEIVGDL. LPPGVVNVVNGAGGVIGEYLATSKRIAKVAFTGSTEVG
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Template Sequence  PLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVG
Template Known Secondary structure  TT


TT

TT

TTS

S
TTT
TT

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   576...580.........590.........600.........610.........620.........630.........640.........650.....
 
   252....... 260.........270.........280.........290.........300. ........310.........320.........
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Query Sequence  QQIMQYAT. QNIIPVTLELGGKSPNIFFADVMDEEDAFFDKALEGFALFAF. NQGEVCTCPSRALVQESIYERFMERAIR
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Template Sequence  KHIMKSCALSNVKKVSLELGGKSPLIIFAD. . . . . . CDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVE
Template Known Secondary structure 






TT......S
GGGG

TT
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   656...660.........670.........680..... ....690.........700.........710.........720.........
 
   330.........340.........350.........360.........370.........380.........390.........400.........
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Query Sequence  RVESIRSGNPLDSVTQMGAQVSHGQLETILNYIDIGKKEGADVLTGGRRKLLEGELKDGYYLEPTILFGQNNMRVFQEEI
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Template Sequence  EVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQV. . . . PRPGFFFQPTVFTDVEDHMYIAKEES
Template Known Secondary structure  T

BS
TTSTT

B


SSTT


SB
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B

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   730.........740.........750.........760.........770......... 780.........790.........800.....
 
   410......... 420.........430.........440.........450.........460.........470.........480.......
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Query Sequence  FGPVLAVTTF. . KTMEEALELANDTQYGLGAGVWSRNGNLAYKMGRGIQAGRVWTNCYHAYPAHAAFGGYKQSGIGRETH
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Template Sequence  FGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLG
Template Known Secondary structure 
SS
TT
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S


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SS

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B

SGGG

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   806...810.........820.........830.........840.........850.........860.........870.........880.....
 
   488.490.........500....
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Query Sequence  KMMLEHYQQTKCLLVSY
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Template Sequence  EAALNEYLRIKTVTFEY
Template Known Secondary structure  GGG
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   886...890.........900..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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