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Job DescriptionP37685
Confidence100.00%DateThu Jan 5 11:57:00 GMT 2012
Rank12Aligned Residues487
% Identity27%Templatec2jg7G_
PDB info PDB header:oxidoreductaseChain: G: PDB Molecule:antiquitin; PDBTitle: crystal structure of seabream antiquitin and elucidation of2 its substrate specificity
Resolution2.83 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  NNPPSAQIKPGEYGFPLKLKARYDNFIGGEWVAPADGEYYQNLTPVTGQLLCEVASSGKRDIDLALDAAHKVKDKWAHTS
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Template Sequence  NQPKYSWLKELG. . . . . . LSEDNPGVYNGSWG. . GSGEVITSYCPANNEPIARVTQATLAEYEETVQKTREAWKMWADIP
Template Known Secondary structure  GSGGGGGGGGGT......

S
SSS..

S
TTTT


TTS
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   6...10....... ..20.........30. ........40.........50.........60.........70.......
 
   83......90.........100.........110.........120.........130.........140..... ....150.........160.
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Query Sequence  VQDRAAILFKIADRMEQNLELLATAETWDNGKPIRETSAADVPLAIDHFRYFASCIRAQEGGI. SEVDSETVAYHFHEPL
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Template Sequence  APKRGEIVRQIGDALRKKIKVLGSLVSLEMGKIYVEGV. GEVQEYVDVCDYAVGLSRMIGGPVLPSERPGHALIEQWNPV
Template Known Secondary structure  T


.TTT




SSTT
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   78.80.........90.........100.........110..... ....120.........130.........140.........150......
 
   162.......170.........180.........190.........200.........210... ......220.........230......
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Query Sequence  GVVGQIIPWNFPLLMASWKMAPALAAGNCVVLKPARLTPLSVLLLMEIVGDL. . . . . LPPGVVNVVNGAGGVIGEYLATS
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Template Sequence  GLVGIITAFNFPVAVYGWNNAIALTCGNVCLWKGAPTTPLTSVAVTKIVAEVLEQNNLPGAICSMTCG. GADIGTAMAKD
Template Known Secondary structure  S

SSSTTTT


TT
TT

GGG

.S
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   157..160.........170.........180.........190.........200.........210.........220.... .....230.....
 
   237..240.........250.........260.........270.........280.........290.........300. ........310.....
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Query Sequence  KRIAKVAFTGSTEVGQQIMQYATQNIIPVTLELGGKSPNIFFADVMDEEDAFFDKALEGFALFAF. NQGEVCTCPSRALV
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Template Sequence  ERVDLLSFTGSTHVGKMVAMMVQERFGRKLLELGGNNAIIVFED. . . . . . ADLNLVVPSAVFASVGTAGQRCTTTRRLML
Template Known Secondary structure  TT
SS
TT





TT......S
GGGG
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   236...240.........250.........260.........270......... 280.........290.........300.........
 
   316...320.........330.........340.........350.........360.........370.........380.........390.....
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Query Sequence  QESIYERFMERAIRRVESIRSGNPLDSVTQMGAQVSHGQLETILNYIDIGKKEGADVLTGGRRKLLEGELKDGYYLEPTI
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Template Sequence  HESVHDAVVERIAKAYKQVRIGDPWDPSTLYGPLHTKQAVDQYLAAIEQAKQQGGTLVCGGKVM. . . . DRPGNYVEPTII
Template Known Secondary structure  TTTTT

B

TTSTT
SB


SSTT


SB
....SSSSS
B

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   310.........320.........330.........340.........350.........360.........370... ......380.....
 
   396...400.........410.........420.........430.........440.........450. ........460....... ..470..
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Query Sequence  LFGQNNMRVFQEEIFGPVLAVTTFKTMEEALELANDTQYGLGAGVWSRNGNLAYKM. . GRGIQAGRVWTNCYHA. YPAHA
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Template Sequence  TGLAHDAPIVHTETFVPILYVLKFKTEEEAFAWNNEVQQGLSSSIFTKDLGRVFRWLGPKGSDCGIVNVNIPTSGAEIGG
Template Known Secondary structure 


TT
S


SS

SS

S


STTS

SSSS
TT


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   386...390.........400.........410.........420.........430.........440.........450.........460.....
 
   473......480.........490.........500..... ....
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Query Sequence  AFGGYKQSGIGRETHKMMLEHYQQTKCLLVSYS. DKPL
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Template Sequence  AFGGEKHTGGGRESGSDSWKQYMRRSTCTINYSKDLPL
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SGGG
S

STTGGGGG
S




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   466...470.........480.........490.........500...
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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