 |
Job Description | P37685 | Confidence | 17.58% | Date | Thu Jan 5 11:57:00 GMT 2012 |
Rank | 66 | Aligned Residues | 75 |
% Identity | 12% | Template | c1vjtA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:alpha-glucosidase; |
PDBTitle: crystal structure of alpha-glucosidase (tm0752) from thermotoga2 maritima at 2.50 a resolution
|
Resolution | 2.50 Å |
|
 |
  |   |
202 | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | V | L | L | L | M | E | I | V | G | D | L | L | P | P | G | V | V | N | V | V | N | G | A | G | G | V | I | G | E | Y | L | A | T | S | K | R | I | A | K | V | A | F | T | G | S | T | E | V | G | Q | Q | I | M | Q | Y | A | T | Q | N | I | I | P | V | T | L | E | L | G | G | K | S | P | N | I |
Query Conservation |   |
  |   |   |   |
|   |   |
|   |   |   |
|   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |
|
|
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|   |   |
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |
|
|   |
|
|   |
|   |   |   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |   |   |
|   |   |   |   |   |
|
|
|
|   |   |
Template Sequence |   |
L | A | L | E | I | A | E | K | X | K | K | X | A | P | K | A | Y | L | X | Q | T | A | N | P | V | F | E | I | T | Q | A | V | R | R | W | T | G | A | N | I | V | G | F | C | H | G | V | A | G | V | Y | E | V | F | E | K | L | D | L | D | P | E | E | V | D | W | Q | V | A | G | V | N | H | G | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  | S |
|
|
|  |  |  |
|
|
| G | G | G | G |  |  |  |  |  |  |  | T | T |
|
| G | G | G |  |  |  |  |  |  |  |  | T | T |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
138 | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|