Return to main results Retrieve Phyre Job Id

Job DescriptionP30136
Confidence34.56%DateThu Jan 5 11:45:53 GMT 2012
Rank164Aligned Residues119
% Identity26%Templated1vrda1
SCOP infoTIM beta/alpha-barrel Inosine monophosphate dehydrogenase (IMPDH) Inosine monophosphate dehydrogenase (IMPDH)
Resolution2.18

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   236...240.........250.........260.........270.........280... ......290.........300.........
Predicted Secondary structure 


















......










Query SS confidence 















































. . . . . .

























Query Sequence  VNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWI. . . . . . LRNSPVPIGTVPIYQALEKVNGIAED
Query Conservation 







     
  



   
   













  

  
......
  












     
    
Alig confidence 








......
































......



















......
Template Conservation           ......            
   
 
             
  
       




 
 
   
   ......
Template Sequence  VGAAVGTSP. . . . . . ETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAGNVATPEGTEAL. . . . . .
Template Known Secondary structure 

SST......TTT
S

S

SS
TTS

S......
Template Predicted Secondary structure 

......


















......
Template SS confidence 















































































   216...220.... .....230.........240.........250.........260.........270.........280...
 
   310.........320.........330.........340.........350.........360.........370.........380.........
Predicted Secondary structure 



















Query SS confidence 















































































Query Sequence  LTWEAFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHQENFLYQHFREICEICAAYDVS
Query Conservation 

 
     

 

  



 


 

          
  








 
 


    




  

 



   



Alig confidence  .............







....................






































Template Conservation  .............  



 
.................... 
   

           
 
    
  
        
 
Template Sequence  . . . . . . . . . . . . . IKAGADAV. . . . . . . . . . . . . . . . . . . . KVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDVP
Template Known Secondary structure  .............TT
S....................
SS
STT





TTT

Template Predicted Secondary structure  .............



....................




















Template SS confidence 















































































   284.....290. ........300.........310.........320.........330
 
   390.........
Predicted Secondary structure 






Query SS confidence 









Query Sequence  LSLGDGLRPG
Query Conservation 









Alig confidence 









Template Conservation 


 


  
Template Sequence  IIADGGIRYS
Template Known Secondary structure  S


S
Template Predicted Secondary structure 




Template SS confidence 









   331........340
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions