Return to main results Retrieve Phyre Job Id

Job DescriptionP30136
Confidence35.70%DateThu Jan 5 11:45:53 GMT 2012
Rank159Aligned Residues109
% Identity17%Templated1un7a2
SCOP infoTIM beta/alpha-barrel Metallo-dependent hydrolases N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain
Resolution2.05

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   304.....310.........320........ .330.........340...... . ..350. .......
Predicted Secondary structure 







......
...........



........



Query SS confidence 
























. . . . .

















.
. . . . . . . . . . .



. . . . . . . .






Query Sequence  NGIAEDLTWEAFRDTLLEQAEQGVD. . . . . YFTIHAGVLLRYVPMTAK. R. . . . . . . . . . . LTGI. . . . . . . . VSRGGSI
Query Conservation   
    

 
     

 

  


.....
 


 

          .
...........  

........






Alig confidence 
























.....

















.
...........



........






Template Conservation 
 

 
   
 
      
   







 

         
               

 











    


Template Sequence  GADTMDASFSTLDIMSSRLPEEGTTSFLATTITQEHGNISQALVNAREWKAAEESSLLGAELLGIHLEGPFVSPKRAGAQ
Template Known Secondary structure  TGGG
SGGGGT

S


SGGGSSS
SSS
GGG
TTS
Template Predicted Secondary structure 



































Template SS confidence 















































































   6970.........80.........90.........100.........110.........120.........130.........140........
 
   359360.........370.........380.........390.........400.........410.........420.........430.......
Predicted Secondary structure 

























Query SS confidence 














































































Query Sequence  MAKWCLSHHQENFLYQHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFAELHTLGELTKIAWEYDVQVMIEGPGH
Query Conservation   
 


    




  

 



   













 
 

 
 

 


 




  

 
 










Alig confidence 






.....























.................




















...

Template Conservation      
  .....
       
     
 

 




.................
  
    
  
   

 


...

Template Sequence  PKEWIRP. . . . . SDVELFKKWQQEAGGLIKIVTLAP. . . . . . . . . . . . . . . . . EEDQHFELIRHLKDESIIASM. . . GH
Template Known Secondary structure 
GGG


.....

TTT

G.................GGSGGGTT
...
S
Template Predicted Secondary structure 



.....







.................






...
Template SS confidence 














































































   149150..... ....160.........170......... 180.........190.........200 ..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions