 |
Job Description | P30136 | Confidence | 35.70% | Date | Thu Jan 5 11:45:53 GMT 2012 |
Rank | 159 | Aligned Residues | 109 |
% Identity | 17% | Template | d1un7a2 |
SCOP info | TIM beta/alpha-barrel
| Metallo-dependent hydrolases
| N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain
|
Resolution | 2.05 |
|
 |
  |   |
304 | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | |
. | |
|
|
|
|
|
|
|
|
|
|
. | . | 350 | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
Query Sequence |   |
N | G | I | A | E | D | L | T | W | E | A | F | R | D | T | L | L | E | Q | A | E | Q | G | V | D | . |
. |
. |
. |
. |
Y | F | T | I | H | A | G | V | L | L | R | Y | V | P | M | T | A | K | . |
R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | T | G | I | . |
. |
. |
. |
. |
. |
. |
. |
V | S | R | G | G | S | I |
Query Conservation |   |
  |
|   |   |   |   |
|
|   |
|   |   |   |   |   |
|
|   |
|
|   |   |
|
|
| . | . | . | . | . |
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   | . |
| . | . | . | . | . | . | . | . | . | . | . |   |   |
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |
|   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |
|
|
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |   |
|
|
|
Template Sequence |   |
G | A | D | T | M | D | A | S | F | S | T | L | D | I | M | S | S | R | L | P | E | E | G | T | T | S | F | L | A | T | T | I | T | Q | E | H | G | N | I | S | Q | A | L | V | N | A | R | E | W | K | A | A | E | E | S | S | L | L | G | A | E | L | L | G | I | H | L | E | G | P | F | V | S | P | K | R | A | G | A | Q |
Template Known Secondary structure |   |
T |  |  | G | G | G |
| S |  |  |  |  |  |  |  |  |  |  | G | G | G | G | T |  |  |  |  |  |  |  |
|
| S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | G | G | G | S | S | S |  |  |  |  |  |  |  |  |
| S | S | S |
| G | G | G |
| T | T | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
69 | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
  |
  |   |
359 | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | A | K | W | C | L | S | H | H | Q | E | N | F | L | Y | Q | H | F | R | E | I | C | E | I | C | A | A | Y | D | V | S | L | S | L | G | D | G | L | R | P | G | S | I | Q | D | A | N | D | E | A | Q | F | A | E | L | H | T | L | G | E | L | T | K | I | A | W | E | Y | D | V | Q | V | M | I | E | G | P | G | H |
Query Conservation |   |
  |
|   |
|
|
|   |   |   |   |
|
|
|
|
|   |   |
|
|   |
|
|
|
|   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|   |
|   |
|
|   |
|
|
|   |
|
|
|
|
|   |   |
|
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
Template Conservation |   |
  |   |   |   |
|   |   | . | . | . | . | . |
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|   |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|
|   |
|
|
| . | . | . |
|
|
Template Sequence |   |
P | K | E | W | I | R | P | . |
. |
. |
. |
. |
S | D | V | E | L | F | K | K | W | Q | Q | E | A | G | G | L | I | K | I | V | T | L | A | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | E | D | Q | H | F | E | L | I | R | H | L | K | D | E | S | I | I | A | S | M | . |
. |
. |
G | H |
Template Known Secondary structure |   |
| G | G | G |
|
|
| . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  |
| G | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | G | G | S | G | G | G |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  | . | . | . |
| S |
Template Predicted Secondary structure |   |
|  |  |  |
|
|
| . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
149 | 150 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | |
|
|
. | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|