 |
Job Description | P30136 | Confidence | 29.14% | Date | Thu Jan 5 11:45:53 GMT 2012 |
Rank | 185 | Aligned Residues | 77 |
% Identity | 19% | Template | d1ps9a1 |
SCOP info | TIM beta/alpha-barrel
| FMN-linked oxidoreductases
| FMN-linked oxidoreductases
|
Resolution | 2.20 |
|
 |
  |   |
249 | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 270 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 280 | . | . | . | . | . | . | . | |
|
. | . | 290 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | E | E | E | V | E | K | L | V | W | S | T | R | W | G | A | D | T | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
M | D | L | S | T | G | R | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | H | E | T | R | E | W | I | L | R | N | S | . |
. |
P | V | P | I | G | T | V | P | I | Y | Q | A |
Query Conservation |   |
|   |   |
|
|
|
|   |   |   |
|   |   |   |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|
|   |   |
|
|   |   |
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
| . | . | . | . | . | . | . |
Template Conservation |   |
|   |   |   |   |   |
|
|   |   |
|   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|   |   |
|
|
|
|
|   |   |
|   |
|   |
|   |
|
|
|
|   |
|
|
|   |
|   |   |   |
|
|
|   |
|
|
|   |   |   |
|   |
|   |   |
|   | . | . | . | . | . | . | . |
Template Sequence |   |
I | D | N | F | A | R | C | A | Q | L | A | R | E | A | G | Y | D | G | V | E | V | M | G | S | E | G | Y | L | I | N | E | F | L | T | L | R | T | N | Q | R | S | D | Q | W | G | G | D | Y | R | N | R | M | R | F | A | V | E | V | V | R | A | V | R | E | R | V | G | N | D | F | I | I | I | . |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  |
| B | T | S |  |  |  |  |  |  |
| T | T | T |
|
|
|
| S | T | T | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S |  |  |  | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | |
|
|
|
|
|
|
  |
  |   |
300 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | E | K | V | N | G | I | A | E | D | . |
. |
. |
. |
. |
L | T | W | E | A | F | R | D | T | L | L | E | Q | A | E | Q | G | V | D | Y | F | T | I | H | A | G |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |   | . | . | . | . | . |
|
|   |
|   |   |   |   |   |
|
|   |
|
|   |   |
|
|
|
|   |
|
|
|   |
|
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . |
|
|
|   |   |   |
|   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|   |
|   |   |
|
Template Sequence |   |
. |
. |
. |
Y | R | L | S | M | L | D | L | V | E | D | G | G | T | F | A | E | T | V | E | L | A | Q | A | I | E | A | A | G | A | T | I | I | N | T | G | I | G |
Template Known Secondary structure |   |
. | . | . |  |  |  |  |  |  |
|
| S | T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
. | . | . |  |  |
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
213 | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|