Job Description P30136 Confidence 63.99% Date Thu Jan 5 11:45:53 GMT 2012 Rank 74 Aligned Residues 133 % Identity 15% Template c3rgqA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:protein-tyrosine phosphatase mitochondrial 1; PDBTitle: crystal structure of ptpmt1 in complex with pi(5)p Resolution 2.05 Å

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		234	.	.	.	.	.			240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.								.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.				.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure								.	.																																			.	.	.	.	.	.	.																			.	.	.
Query SS confidence								.	.																																			.	.	.	.	.	.	.																			.	.	.
Query Sequence		V	K	V	N	A	N	.	.	I	G	N	S	A	V	T	S	S	I	E	E	E	V	E	K	L	V	W	S	T	R	W	G	A	D	T	V	M	D	L	S	T	G	.	.	.	.	.	.	.	R	Y	I	H	E	T	R	E	W	I	L	R	N	S	P	V	P	I	.	.	.	G	T	V	P	I	Y	Q	A	L	E
Query Conservation								.	.																																			.	.	.	.	.	.	.																			.	.	.
Alig confidence								.	.																	.	.	.	.	.	.													.	.	.	.	.	.	.																			.	.	.
Template Conservation																										.	.	.	.	.	.
Template Sequence		H	R	I	D	H	T	V	L	L	G	A	L	P	L	K	N	M	T	R	R	L	V	L	D	.	.	.	.	.	.	E	N	V	R	G	V	I	T	M	N	E	E	Y	E	T	R	F	L	C	N	T	S	K	E	W	K	K	A	G	V	E	Q	L	R	L	S	T	V	D	M	T	G	V	P	T	L	A	N	L	H
Template Known Secondary structure					S	S	S					S				G	G	G							T	.	.	.	.	.	.	S															T	T	T	S									T	T									S	S	T	T
Template Predicted Secondary structure																										.	.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130							.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	N	G	I	A	E	D	L	T	W	E	A	F	R	D	T	L	L	E	Q	A	E	Q	G	V	D	Y	F	T	I	H	A	G	V	L	L	R	Y	V	P	M	T	A	K	R	L	T	G	I	V	S	R	G	G	S	I	M	A	K	W	C	L	S	H	H	Q	E	N	F	L	Y	Q	H	F	R	E	I	C	E
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.												.							.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.									.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.												.							.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.									.	.
Template Sequence		K	G	V	.	.	.	.	.	.	.	.	.	.	.	.	Q	F	A	L	K	Y	Q	A	L	G	Q	.	C	V	Y	V	H	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	G	R	S	R	S	A	T	M	V	A	A	Y	L	I	Q	V	H	N	W	S	.	P	E	E	A	I	E	A	I	.	.
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.									T	T		.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S	S	S																		.									.	.
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.												.							.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.									.	.
Template SS confidence
		181	.	.													.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200															.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	C	A	A	Y	D	V	S	L	S	L	G	D	G	L	R	P	G	S	I	Q	D	A	N	D	E	A	Q	F	A	E	L	H
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	A	K	I	R	S	H	I	S	I	R	P	S	Q	L	E	V	L	K	E	F	H
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.				S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions