Job Description P30136 Confidence 71.04% Date Thu Jan 5 11:45:53 GMT 2012 Rank 49 Aligned Residues 145 % Identity 23% Template c3ng3A_ PDB info PDB header:lyase Chain: A: PDB Molecule:deoxyribose-phosphate aldolase; PDBTitle: crystal structure of deoxyribose phosphate aldolase from mycobacterium2 avium 104 in a schiff base with an unknown aldehyde Resolution 2.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.							210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.																																																								.
Query SS confidence																				.	.	.	.	.	.																																																								.
Query Sequence		A	H	L	P	E	N	I	T	A	E	F	V	R	D	E	V	A	A	.	.	.	.	.	.	G	R	A	I	I	P	A	N	I	N	H	P	E	S	E	P	M	I	I	G	R	N	F	L	V	K	V	N	A	N	I	G	N	S	A	V	T	S	S	I	E	E	E	V	E	K	L	V	W	S	T	R	W	G	A	.
Query Conservation																				.	.	.	.	.	.																																																								.
Alig confidence																				.	.	.	.	.	.														.	.	.	.	.	.	.																																				.
Template Conservation																																							.	.	.	.	.	.	.
Template Sequence		T	L	L	K	P	E	A	T	A	A	D	V	A	A	L	V	T	E	A	A	E	L	G	V	Y	A	V	C	V	S	P	P	M	V	P	A	A	.	.	.	.	.	.	.	V	Q	A	G	A	R	V	A	S	V	A	G	F	P	S	G	K	H	V	S	A	V	K	A	H	E	A	A	L	A	V	A	S	G	A	A
Template Known Secondary structure						T	T																	T		S						G	G	G					.	.	.	.	.	.	.			T									S	T	T	T			S															T	T		S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.								.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
				265	.	.	.	.	270	.	.			.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310												.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.									.	.																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.									.	.																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	D	T	V	M	D	L	S	T	.	.	G	R	Y	I	H	E	T	R	E	W	I	L	R	N	S	P	V	P	I	G	T	V	P	I	Y	Q	A	L	E	K	V	N	G	I	A	E	D	L	.	.	.	.	.	.	.	.	.	.	.	T	W	E	A	F	R	D	T	L	L	E	Q	A	E	Q	G	V	D	Y
Query Conservation		.	.									.	.																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.									.	.													.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	I	D	M	V	I	D	V	G	A	A	L	A	G	D	L	D	G	V	R	A	D	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	R	G	A	V	G	G	A	V	L	K	V	I	V	E	S	S	A	L	L	A	L	A	D	E	H	T	L	V	R	V	C	R	A	A	E	D	A	G	A	D	F
Template Known Secondary structure														T	T											.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	S															S															T	T		S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.														.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		330	.	.	.	.	.							.	.	.	.	340	.	.	.	.	.	.				.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.												.	.	.
Query SS confidence								.	.	.	.	.	.												.	.	.
Query Sequence		F	T	I	H	A	G	.	.	.	.	.	.	V	L	L	R	Y	V	P	M	T	A	K	.	.	.	R	L	T	G	I	V	S	R	G	G
Query Conservation								.	.	.	.	.	.												.	.	.
Alig confidence								.	.	.	.	.	.												.	.	.
Template Conservation
Template Sequence		V	K	T	S	T	G	F	H	P	S	G	G	A	S	V	R	A	V	A	L	M	A	E	A	V	G	G	R	L	G	V	K	A	S	G	G
Template Known Secondary structure							S			T	T		S														T	T	S	S						S	S
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions