 |
Job Description | P30136 | Confidence | 63.37% | Date | Thu Jan 5 11:45:53 GMT 2012 |
Rank | 76 | Aligned Residues | 52 |
% Identity | 27% | Template | c3kruC_ |
PDB info |
PDB header:oxidoreductase | Chain: C: PDB Molecule:nadh:flavin oxidoreductase/nadh oxidase; |
PDBTitle: crystal structure of the thermostable old yellow enzyme from2 thermoanaerobacter pseudethanolicus e39
|
Resolution | 1.60 Å |
|
 |
  |   |
304 | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | 330 | . | . | . | . | . | |
|
|
. | . | . | . | 340 | . | . | . | . | . | . | |
. | . | . | 350 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | G | I | A | E | D | L | T | W | E | A | F | R | D | T | L | L | E | Q | A | E | Q | . |
. |
. |
. |
. |
. |
. |
G | V | D | Y | F | T | I | H | A | G | . |
. |
. |
V | L | L | R | Y | V | P | M | T | A | K | . |
R | L | T | G | I | V | S | R | G | G | S | I |
Query Conservation |   |
  |
|   |   |   |   |
|
|   |
|   |   |   |   |   |
|
|   |
|
|   |   | . | . | . | . | . | . | . |
|
|
|
|   |
|
|
|   |
| . | . | . |
|   |   |   |   |   |   |   |   |   |   | . |
|   |   |
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . | . | . |
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |
|
|
|
|
|
|
|
|
|   |   |   |
|
|
|
|   |
|
|
|
|
|   |   |
|   |
|
|
|   | . | . | . |
|
|
|
|
|
Template Sequence |   |
Y | K | L | P | R | E | L | S | V | E | E | I | K | S | I | V | K | A | F | G | E | A | A | K | R | A | N | L | A | G | Y | D | V | V | E | I | H | A | A | H | G | Y | L | I | H | E | F | L | S | P | L | S | N | K | R | K | D | E | . |
. |
. |
Y | G | N | S | I |
Template Known Secondary structure |   |
S |
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |  |
| T | T | T |
|
|
|
| S | T | . | . | . | T | S | S | S |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
127 | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | |
|
|
. | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|