Job Description P30136 Confidence 82.26% Date Thu Jan 5 11:45:53 GMT 2012 Rank 23 Aligned Residues 146 % Identity 13% Template c3k13A_ PDB info PDB header:transferase Chain: A: PDB Molecule:5-methyltetrahydrofolate-homocysteine methyltransferase; PDBTitle: structure of the pterin-binding domain metr of 5-2 methyltetrahydrofolate-homocysteine methyltransferase from3 bacteroides thetaiotaomicron Resolution 2.00 Å

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		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.																.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.						.	370
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Query Sequence		T	W	E	A	F	R	D	T	L	L	E	Q	A	E	Q	G	V	D	Y	F	T	I	H	A	G	V	L	L	R	Y	V	P	M	T	A	K	R	L	T	G	I	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	G	G	S	I	M	A	K	W	C	L	S	H	H	Q	.	.	.	.	.	E	N
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation
Template Sequence		K	Y	D	E	A	L	S	I	A	R	Q	Q	V	E	D	G	A	L	V	I	D	V	N	X	D	D	G	L	L	D	A	R	T	E	X	T	T	F	L	N	L	I	X	S	E	P	E	I	A	R	V	P	V	X	I	D	S	S	K	W	E	V	I	E	A	G	L	K	C	L	Q	G	K	S	I	V	N	S	I	S
Template Known Secondary structure																T	T		S									T	T	S															T						T	S							S													S	S
Template Predicted Secondary structure
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
		371	.			.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.		.	.	.	.	.	.			.	430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure				.	.																																																			.							.	.														.	.	.	.
Query SS confidence				.	.																																																			.							.	.														.	.	.	.
Query Sequence		F	L	.	.	Y	Q	H	F	R	E	I	C	E	I	C	A	A	Y	D	V	S	L	S	L	G	D	G	L	R	P	G	S	I	Q	D	A	N	D	E	A	Q	F	A	E	L	H	T	L	G	E	L	T	K	I	.	A	W	E	Y	D	V	.	.	Q	V	M	I	E	G	P	G	H	V	P	M	Q	.	.	.	.
Query Conservation				.	.																																																			.							.	.														.	.	.	.
Alig confidence				.	.																																									.	.	.	.	.						.							.	.														.	.	.	.
Template Conservation																																														.	.	.	.	.
Template Sequence		L	K	E	G	E	E	V	F	L	E	H	A	R	I	I	K	Q	Y	G	A	A	T	V	V	X	A	F	D	E	K	G	Q	A	D	T	A	A	R	K	I	E	V	C	E	.	.	.	.	.	R	A	Y	R	L	L	V	D	K	V	G	F	N	P	H	D	I	I	F	D	P	N	V	L	A	V	A	T	G	I	E
Template Known Secondary structure		S	T	T																T							S			T	T					S										.	.	.	.	.										T				G	G	G											S	S	S		G
Template Predicted Secondary structure																																														.	.	.	.	.
Template SS confidence
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.						500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530
									442	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	M	I	R	R	N	M	T	E	E	L	E	H	C	H	E	A	P	F	Y	T
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	H	N	N	Y	A	V	D	F	I	E	A	T	G	W	I	R	K	N	L	P	G	A	H	V	S	G
Template Known Secondary structure		G	G	T	T																S	T	T
Template Predicted Secondary structure
Template SS confidence
		531	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions