Job Description P30136 Confidence 62.45% Date Thu Jan 5 11:45:53 GMT 2012 Rank 78 Aligned Residues 145 % Identity 14% Template c3fluD_ PDB info PDB header:lyase Chain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from the pathogen2 neisseria meningitidis Resolution 2.00 Å

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		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.							.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.
Query Sequence		L	V	K	V	N	A	N	I	G	N	S	A	V	T	S	S	I	E	E	E	V	E	K	L	V	W	S	T	R	W	G	A	D	T	V	M	D	L	S	.	.	.	.	.	.	T	G	R	Y	I	H	E	T	R	E	W	I	L	R	N	S	P	V	P	I	G	T	V	P	I	Y	Q	A	L	E	K	V	N	G	I
Query Conservation																																									.	.	.	.	.	.
Alig confidence											.	.	.	.																											.	.	.	.	.	.																						.	.	.
Template Conservation											.	.	.	.																																																						.	.	.
Template Sequence		R	V	P	V	I	A	G	T	G	.	.	.	.	A	N	N	T	V	E	A	I	A	L	S	Q	A	A	E	K	A	G	A	D	Y	T	L	S	V	V	P	Y	Y	N	K	P	S	Q	E	G	I	Y	Q	H	F	K	T	I	A	E	A	T	S	I	P	M	I	.	.	.	I	Y	N	V	P	G	R	T	V	V	S
Template Known Secondary structure		S	S								.	.	.	.		S	S															T		S									S	S																	T			S				.	.	.									S	S
Template Predicted Secondary structure											.	.	.	.																																																						.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.					.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.				.	.	.	.	.	.	.	.	140	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.						.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																																																												.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.
Query Sequence		A	E	D	L	T	W	E	A	F	R	D	T	L	L	E	Q	A	E	Q	G	V	D	Y	F	T	I	H	A	G	V	L	L	R	Y	V	P	M	T	A	K	R	L	T	G	I	V	S	R	G	G	S	I	M	A	K	W	C	L	.	.	.	.	.	S	H	H	Q	E	N	F	L	Y	Q	H	F	R	E	I	C	E
Query Conservation																																																												.	.	.	.	.
Alig confidence		.	.	.																																																								.	.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	M	T	N	D	T	I	L	R	L	A	E	I	P	N	I	V	G	V	K	E	A	S	G	N	I	G	S	N	I	E	L	I	N	R	A	P	E	G	F	V	V	L	S	G	D	D	H	T	A	L	P	F	M	L	C	G	G	H	G	V	I	T	V	A	A	N	A	A	P	K	L	F	A	D	M	C	R
Template Known Secondary structure		.	.	.										T	T	S	T	T								S													S		T	T								G	G	G							T	T							S	G	G	G	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		382	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	C	A	A	Y	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	L	Q	G	D
Template Known Secondary structure						T
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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